RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 RASSF3Q86WH2 238 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 ABCA7Q8IZY2 2146 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 ALLCQ8N6M5 410 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 TXNDC5Q8NBS9 432 aaKnown RBP18.84■□□□□ 0.61
TPM3-220ENST00000509601 ZC3H10Q96K80 434 aaKnown RBP18.84■□□□□ 0.61
TPM3-220ENST00000509601 NT5C1BQ96P26 610 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 ZDHHC4Q9NPG8 344 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 SEMA4GQ9NTN9 838 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 CHMP5Q9NZZ3 219 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 MARK1Q9P0L2 795 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 DEC1Q9P2X7 70 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 RALGAPA1Q6GYQ0 2036 aa18.84■□□□□ 0.61
TPM3-220ENST00000509601 TBC1D3BA6NDS4 549 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 SGK1O00141 431 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 ADAM23O75077 832 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 GABBR2O75899 941 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 GNA14O95837 355 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 ZBED1O96006 694 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 CCDC192P0DO97 292 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 YWHAGP61981 247 aaKnown RBP eCLIP18.83■□□□□ 0.6
TPM3-220ENST00000509601 PUM1Q14671 1186 aaKnown RBP eCLIP18.83■□□□□ 0.68e-12■■□□□ 12.8
TPM3-220ENST00000509601 CSRP2Q16527 193 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 TMEM270Q6UE05 265 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 LCLAT1Q6UWP7 414 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 TPGS1Q6ZTW0 290 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 ERMP1Q7Z2K6 904 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 TADA2BQ86TJ2 420 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 MIB1Q86YT6 1006 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 ARHGEF19Q8IW93 802 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 TRIML1Q8N9V2 468 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 TSTD1Q8NFU3 115 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 LOXL4Q96JB6 756 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 ULBP1Q9BZM6 244 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 LSM7Q9UK45 103 aaKnown RBP18.83■□□□□ 0.6
TPM3-220ENST00000509601 STARD13Q9Y3M8 1113 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 PCDHB4Q9Y5E5 795 aa18.83■□□□□ 0.6
TPM3-220ENST00000509601 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.83■□□□□ 0.6
TPM3-220ENST00000509601 PRR5-ARHGAP8B1AHC4 643 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 KLF8O95600 359 aaPredicted RBP18.82■□□□□ 0.6
TPM3-220ENST00000509601 CALCAP01258 141 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 PAEPP09466 180 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 CISD3P0C7P0 127 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 TYRP14679 529 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 DGKEP52429 567 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 ATXN1P54253 815 aaKnown RBP18.82■□□□□ 0.6
TPM3-220ENST00000509601 BCAT1P54687 386 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 SLC8A3P57103 927 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 COG7P83436 770 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 ARHGAP8P85298 464 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 GOLGA8FQ08AF8 430 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 GOLGA8DPQ0D2H9 430 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 BST2Q10589 180 aaKnown RBP18.82■□□□□ 0.6
TPM3-220ENST00000509601 EFEMP1Q12805 493 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 CNGA2Q16280 664 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 PLK5Q496M5 336 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 HSF5Q4G112 596 aaPredicted RBP18.82■□□□□ 0.6
TPM3-220ENST00000509601 RRAGAQ7L523 313 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 ARHGAP18Q8N392 663 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 PPM1KQ8N3J5 372 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 SLC35F5Q8WV83 523 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 KCTD13Q8WZ19 329 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 CDK5RAP1Q96SZ6 601 aaKnown RBP18.82■□□□□ 0.6
TPM3-220ENST00000509601 BBS2Q9BXC9 721 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 DUSP15Q9H1R2 295 aaPredicted RBP18.82■□□□□ 0.6
TPM3-220ENST00000509601 ARRDC1-AS1Q9H2J1 176 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 WDR35Q9P2L0 1181 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 RASAL2Q9UJF2 1139 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 FBXO10Q9UK96 956 aa18.82■□□□□ 0.6
TPM3-220ENST00000509601 NEDD8-MDP1E9PL57 170 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 CACNG3O60359 315 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 AFPP02771 609 aaKnown RBP18.81■□□□□ 0.6
TPM3-220ENST00000509601 FOXK2Q01167 660 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 LMNB2Q03252 620 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 CETN1Q12798 172 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 TERB1Q8NA31 727 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 CNOT6LQ96LI5 555 aaKnown RBP18.81■□□□□ 0.6
TPM3-220ENST00000509601 KREMEN1Q96MU8 473 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 LRRC4Q9HBW1 653 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 HESX1Q9UBX0 185 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 INVSQ9Y283 1065 aa18.81■□□□□ 0.6
TPM3-220ENST00000509601 EPN2O95208 641 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 HMBSP08397 361 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 ZNF132P52740 706 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 GCNT1Q02742 428 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 PREPLQ4J6C6 727 aaPredicted RBP18.8■□□□□ 0.6
TPM3-220ENST00000509601 EOGTQ5NDL2 527 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 GRAMD4Q6IC98 578 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 ANO7Q6IWH7 933 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 PMF1Q6P1K2 205 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 PRR23CQ6ZRP0 262 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 TOGARAM2Q6ZUX3 1019 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 MDGA1Q8NFP4 955 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 OLIG1Q8TAK6 271 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 KCNV2Q8TDN2 545 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 XPO6Q96QU8 1125 aaKnown RBP18.8■□□□□ 0.6
TPM3-220ENST00000509601 TPSD1Q9BZJ3 242 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 DNAJC17Q9NVM6 304 aaKnown RBP18.8■□□□□ 0.6
TPM3-220ENST00000509601 MARCH2Q9P0N8 246 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 RWDD2AQ9UIY3 292 aa18.8■□□□□ 0.6
TPM3-220ENST00000509601 AGO1Q9UL18 857 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms