RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 GPR152Q8TDT2 470 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 FAM172AQ8WUF8 416 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 ZNF592Q92610 1267 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 CASP10Q92851 521 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 NT5C3BQ969T7 300 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 HES6Q96HZ4 224 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 CFAP57Q96MR6 1250 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 SERPINB11Q96P15 392 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 TBCBQ99426 244 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 NSUN3Q9H649 340 aaKnown RBP10.84□□□□□ -0.67
RFC1-211ENST00000509084 DZANK1Q9NVP4 752 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 DDX56Q9NY93 547 aaKnown RBP10.84□□□□□ -0.67
RFC1-211ENST00000509084 TRPM5Q9NZQ8 1165 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 GMIPQ9P107 970 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 HCFC2Q9Y5Z7 792 aa10.84□□□□□ -0.67
RFC1-211ENST00000509084 MTCL1Q9Y4B5 1905 aaKnown RBP10.84□□□□□ -0.67
RFC1-211ENST00000509084 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 M0QYT0 321 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 PRPSAP2O60256 369 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 LRCH4O75427 683 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 ENDOD1O94919 500 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 ATP1A1P05023 1023 aaKnown RBP10.83□□□□□ -0.68
RFC1-211ENST00000509084 FYNP06241 537 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 HMGA1P17096 107 aaKnown RBP10.83□□□□□ -0.68
RFC1-211ENST00000509084 PFKLP17858 780 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 CDC25CP30307 473 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 SSR1P43307 286 aaKnown RBP10.83□□□□□ -0.68
RFC1-211ENST00000509084 NRIP1P48552 1158 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 ATP11AP98196 1134 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 DEUP1Q05D60 604 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 MTA1Q13330 715 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 MTMR3Q13615 1198 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 CLUL1Q15846 466 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 CDO1Q16878 200 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 CCDC14Q49A88 953 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 ODF2Q5BJF6 829 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
RFC1-211ENST00000509084 TRNP1Q6NT89 227 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 KLHDC10Q6PID8 442 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 HFE2Q6ZVN8 426 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 RSRC2Q7L4I2 434 aaKnown RBP10.83□□□□□ -0.68
RFC1-211ENST00000509084 ADGRD2Q7Z7M1 963 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 SCD5Q86SK9 330 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 NDRG1Q92597 394 aaKnown RBP10.83□□□□□ -0.68
RFC1-211ENST00000509084 CENPIQ92674 756 aaPredicted RBP10.83□□□□□ -0.68
RFC1-211ENST00000509084 CD101Q93033 1021 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 TLR10Q9BXR5 811 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 CARD9Q9H257 536 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 SMOC2Q9H3U7 446 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 GOLPH3Q9H4A6 298 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 FAM204AQ9H8W3 233 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 SFXN1Q9H9B4 322 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 NMUR1Q9HB89 426 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 ASAH2Q9NR71 780 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 ZMYM5Q9UJ78 669 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 USP18Q9UMW8 372 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 SNX12Q9UMY4 172 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 NAALADL1Q9UQQ1 740 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 PCDHA3Q9Y5H8 950 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 SAR1BQ9Y6B6 198 aa10.83□□□□□ -0.68
RFC1-211ENST00000509084 ATG2AQ2TAZ0 1938 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 ENC1O14682 589 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 IRAK2O43187 625 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 TRUB2O95900 331 aaKnown RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 SPATA31D3P0C874 917 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 RARGP13631 454 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 EPCAMP16422 314 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 PTPN2P17706 415 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 CETN2P41208 172 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 KPNA1P52294 538 aaPredicted RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 RWDD2BP57060 319 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 C15orf59Q2T9L4 293 aaPredicted RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 ARL13BQ3SXY8 428 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 BOLA3Q53S33 107 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 BRMS1LQ5PSV4 323 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 SEL1L2Q5TEA6 688 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 SYPL2Q5VXT5 272 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 SPATA31D4Q6ZUB0 917 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 BNIPLQ7Z465 357 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 PSTKQ8IV42 348 aaKnown RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 CMASQ8NFW8 434 aaPredicted RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 DQX1Q8TE96 717 aaKnown RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 TEKT4Q8WW24 435 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 EDEM1Q92611 657 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 MRPS31Q92665 395 aaKnown RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 RBM41Q96IZ5 413 aaKnown RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 PBKQ96KB5 322 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 PRKD2Q9BZL6 878 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
RFC1-211ENST00000509084 DDIT4Q9NX09 232 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 RNF14Q9UBS8 474 aa10.82□□□□□ -0.68
RFC1-211ENST00000509084 ZNF638Q14966 1978 aaKnown RBP10.82□□□□□ -0.68
RFC1-211ENST00000509084 ZNF840PA6NDX5 716 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 SOBPA7XYQ1 873 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 PER2O15055 1255 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 MDM4O15151 490 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 DDX3YO15523 660 aaKnown RBP10.81□□□□□ -0.68
RFC1-211ENST00000509084 TLR5O60602 858 aa10.81□□□□□ -0.68
RFC1-211ENST00000509084 URI1O94763 535 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms