RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 RNF168Q8IYW5 571 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CYP2W1Q8TAV3 490 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 PIGOQ8TEQ8 1089 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 TSPEARQ8WU66 669 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 SLC25A43Q8WUT9 341 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 NRG4Q8WWG1 115 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 SEPT1Q8WYJ6 367 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 RTF1Q92541 710 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 ZNF75CPQ92670 426 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 KAT5Q92993 513 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 EID2BQ96D98 161 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 RNF125Q96EQ8 232 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CALML4Q96GE6 196 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 FEM1CQ96JP0 617 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CCDC43Q96MW1 224 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 ZNF830Q96NB3 372 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 TWNKQ96RR1 684 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 MNTQ99583 582 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 USP44Q9H0E7 712 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 TM7SF3Q9NS93 570 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 INTS10Q9NVR2 710 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 COQ3Q9NZJ6 369 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 COL20A1Q9P218 1284 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 C5AR2Q9P296 337 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 CPSF2Q9P2I0 782 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 MSRAQ9UJ68 235 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 TMEM5Q9Y2B1 443 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 C2CD2Q9Y426 696 aa4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 USP15Q9Y4E8 981 aaPredicted RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 EIF4G1Q04637 1599 aaKnown RBP4.65□□□□□ -1.67
SMARCA5-202ENST00000508573 HMX3A6NHT5 357 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 C2orf81A6NN90 581 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 PODXLO00592 558 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 SGTAO43765 313 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 SLU7O95391 586 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 NDST3O95803 873 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 TUBB4AP04350 444 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 LPLP06858 475 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 CYP2A6P11509 494 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 NPR1P16066 1061 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 RXRAP19793 462 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 HLA-DPA1P20036 260 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 MAPK3P27361 379 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 PBLDP30039 288 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 ARFIP1P53367 373 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 MANFP55145 182 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 MECOMQ03112 1051 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 ACTN3Q08043 901 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 DMTNQ08495 405 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 STK4Q13043 487 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 NAA25Q14CX7 972 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 KYNUQ16719 465 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 C3orf38Q5JPI3 329 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 KRT40Q6A162 431 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 TAF2Q6P1X5 1199 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 MTFR2Q6P444 385 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 CCDC62Q6P9F0 684 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 SLC2A7Q6PXP3 512 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 PXKQ7Z7A4 578 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 GLRX5Q86SX6 157 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 TTC7BQ86TV6 843 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 ZNF276Q8N554 614 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 TTC39CQ8N584 583 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 SRBD1Q8N5C6 995 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 TMCO5AQ8N6Q1 288 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 ZBTB44Q8NCP5 570 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 TBC1D22AQ8WUA7 517 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 USP6NLQ92738 828 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 ARHGEF2Q92974 986 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 EXOC4Q96A65 974 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 VOPP1Q96AW1 172 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 RGMAQ96B86 450 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 FOXRED1Q96CU9 486 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 FAM120BQ96EK7 910 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 CNDP1Q96KN2 507 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 PPP1R13BQ96KQ4 1090 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 C16orf45Q96MC5 204 aaPredicted RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 NDST4Q9H3R1 872 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 SYNCQ9H7C4 482 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 PAPOLBQ9NRJ5 636 aaKnown RBP4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 RAI14Q9P0K7 980 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 NCDNQ9UBB6 729 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 ZNHIT2Q9UHR6 403 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 PSAT1Q9Y617 370 aa4.64□□□□□ -1.67
SMARCA5-202ENST00000508573 DDX39AO00148 427 aaKnown RBP4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 TXNL1O43396 289 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 THAP12O43422 761 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 SYNCRIPO60506 623 aaKnown RBP4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 KERAO60938 352 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 PIAS2O75928 621 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 MYL4P12829 197 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 LAMP2P13473 410 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 MTHFD2P13995 350 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 PROZP22891 400 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 CD40P25942 277 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 HOXD10P28358 340 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 CIITAP33076 1130 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 THPOP40225 353 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 RGS3P49796 1198 aa4.63□□□□□ -1.67
SMARCA5-202ENST00000508573 TKTL1P51854 596 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms