RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 NEDD8-MDP1E9PL57 170 aa18.87■□□□□ 0.61
SKP2-204ENST00000508514 KHNYNO15037 678 aaKnown RBP18.87■□□□□ 0.61
SKP2-204ENST00000508514 MAP1BP46821 2468 aaKnown RBP18.87■□□□□ 0.61
SKP2-204ENST00000508514 PSAPL1Q6NUJ1 521 aa18.87■□□□□ 0.61
SKP2-204ENST00000508514 KIAA1211LQ6NV74 962 aa18.87■□□□□ 0.61
SKP2-204ENST00000508514 ARMCX6Q7L4S7 300 aa18.87■□□□□ 0.61
SKP2-204ENST00000508514 TATDN2Q93075 761 aa18.87■□□□□ 0.61
SKP2-204ENST00000508514 BBS2Q9BXC9 721 aa18.87■□□□□ 0.61
SKP2-204ENST00000508514 DNAJC17Q9NVM6 304 aaKnown RBP18.87■□□□□ 0.61
SKP2-204ENST00000508514 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
SKP2-204ENST00000508514 STC2O76061 302 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 KIF20AO95235 890 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 KRT13P13646 458 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 RPL13P26373 211 aaKnown RBP18.86■□□□□ 0.61
SKP2-204ENST00000508514 GTF2H1P32780 548 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 PLA2G4AP47712 749 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 RAD23BP54727 409 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 SHC2P98077 582 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 KRT39Q6A163 491 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 GRAMD4Q6IC98 578 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 LPCAT2Q7L5N7 544 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 CCDC186Q7Z3E2 898 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 ZNF276Q8N554 614 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 SLC4A11Q8NBS3 891 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 ERLEC1Q96DZ1 483 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 IMPG2Q9BZV3 1241 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 BCCIPQ9P287 314 aaKnown RBP eCLIP18.86■□□□□ 0.61
SKP2-204ENST00000508514 DNMT3LQ9UJW3 386 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 FBXO10Q9UK96 956 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 CIZ1Q9ULV3 898 aaPredicted RBP18.86■□□□□ 0.61
SKP2-204ENST00000508514 MYH10P35580 1976 aa18.86■□□□□ 0.61
SKP2-204ENST00000508514 NTSR1P30989 418 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 EDRF1Q3B7T1 1238 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 C10orf120Q5SQS8 335 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 PGBD3Q8N328 593 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 DEFB119Q8N690 84 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 CCDC47Q96A33 483 aaKnown RBP18.85■□□□□ 0.61
SKP2-204ENST00000508514 HEXIM2Q96MH2 286 aaKnown RBP18.85■□□□□ 0.61
SKP2-204ENST00000508514 SCAND2PQ9GZW5 306 aaPredicted RBP18.85■□□□□ 0.61
SKP2-204ENST00000508514 CD93Q9NPY3 652 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 CISHQ9NSE2 258 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 PLK2Q9NYY3 685 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 CALCOCO1Q9P1Z2 691 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 WDR35Q9P2L0 1181 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 EVLQ9UI08 416 aaPredicted RBP18.85■□□□□ 0.61
SKP2-204ENST00000508514 NAGPAQ9UK23 515 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 PILRBQ9UKJ0 227 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 TNRC6BQ9UPQ9 1833 aaKnown RBP18.85■□□□□ 0.61
SKP2-204ENST00000508514 GON4LQ3T8J9 2241 aa18.85■□□□□ 0.61
SKP2-204ENST00000508514 FRYQ5TBA9 3013 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 WASH3PC4AMC7 463 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 MAP3K13O43283 966 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 HOXB2P14652 356 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 ITPKAP23677 461 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 PRCPP42785 496 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 PMS1P54277 932 aaKnown RBP18.84■□□□□ 0.61
SKP2-204ENST00000508514 PNOCQ13519 176 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 CBWD6Q4V339 395 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 RAB41Q5JT25 222 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 CBWD3Q5JTY5 395 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 CBWD5Q5RIA9 395 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 PEAR1Q5VY43 1037 aaPredicted RBP18.84■□□□□ 0.61
SKP2-204ENST00000508514 BHMTQ93088 406 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 GABRG3Q99928 467 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 SLC6A17Q9H1V8 727 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 TMEM9BQ9NQ34 198 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 FSCN3Q9NQT6 498 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 RAB20Q9NX57 234 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 CLIC5Q9NZA1 410 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 ANGPTL2Q9UKU9 493 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 WASF3Q9UPY6 502 aa18.84■□□□□ 0.61
SKP2-204ENST00000508514 ATXN2Q99700 1313 aaKnown RBP18.83■□□□□ 0.61
SKP2-204ENST00000508514 PLXND1Q9Y4D7 1925 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 TULP2O00295 520 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 PENKP01210 267 aaPredicted RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 NDUFV2P19404 249 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 NOVA1P51513 510 aaKnown RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 PREPLQ4J6C6 727 aaPredicted RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 TRIM61Q5EBN2 209 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 SPDYCQ5MJ68 293 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 SH3PXD2AQ5TCZ1 1133 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 FYB2Q5VWT5 728 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 ARHGAP17Q68EM7 881 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 BHLHA9Q7RTU4 235 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 TRMT11Q7Z4G4 463 aaKnown RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 PIGZQ86VD9 579 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 SYT12Q8IV01 421 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 FMR1NBQ8N0W7 255 aaPredicted RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 FBXL13Q8NEE6 735 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 IPO4Q8TEX9 1081 aaKnown RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 NDRG1Q92597 394 aaKnown RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 TMEM176AQ96HP8 235 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 FAXDC2Q96IV6 333 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 SPACA7Q96KW9 195 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 XPO6Q96QU8 1125 aaKnown RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 UBXN6Q9BZV1 441 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 LSM7Q9UK45 103 aaKnown RBP18.83■□□□□ 0.6
SKP2-204ENST00000508514 CLEC4EQ9ULY5 219 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 RAD54BQ9Y620 910 aa18.83■□□□□ 0.6
SKP2-204ENST00000508514 USP24Q9UPU5 2620 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms