RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PRR11Q96HE9 360 aaPredicted RBP5.93□□□□□ -1.46
DHFR-204ENST00000508282 HS6ST2Q96MM7 605 aa5.93□□□□□ -1.46
DHFR-204ENST00000508282 WDR24Q96S15 920 aa5.93□□□□□ -1.46
DHFR-204ENST00000508282 GDF15Q99988 308 aa5.93□□□□□ -1.46
DHFR-204ENST00000508282 USP29Q9HBJ7 922 aa5.93□□□□□ -1.46
DHFR-204ENST00000508282 STARD7Q9NQZ5 370 aa5.93□□□□□ -1.46
DHFR-204ENST00000508282 VPS45Q9NRW7 570 aa5.93□□□□□ -1.46
DHFR-204ENST00000508282 FZD4Q9ULV1 537 aa5.93□□□□□ -1.46
DHFR-204ENST00000508282 KCNU1A8MYU2 1149 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 MBPP02686 304 aaPredicted RBP5.92□□□□□ -1.46
DHFR-204ENST00000508282 MST1P26927 711 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 GABRB3P28472 473 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 PBX1P40424 430 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 TXNL4AP83876 142 aaKnown RBP5.92□□□□□ -1.46
DHFR-204ENST00000508282 GPS1Q13098 491 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 SLC14A1Q13336 389 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 PMS2P11Q13670 270 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 ZNF268Q14587 947 aaPredicted RBP5.92□□□□□ -1.46
DHFR-204ENST00000508282 AASDHQ4L235 1098 aaPredicted RBP5.92□□□□□ -1.46
DHFR-204ENST00000508282 FAXCQ5TGI0 409 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 MEX3CQ5U5Q3 659 aaKnown RBP5.92□□□□□ -1.46
DHFR-204ENST00000508282 RAP1GAP2Q684P5 730 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 RANBP10Q6VN20 620 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 CNGA4Q8IV77 575 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 CCDC28AQ8IWP9 274 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 SMG7Q92540 1137 aaKnown RBP5.92□□□□□ -1.46
DHFR-204ENST00000508282 SAP30LQ9HAJ7 183 aa5.92□□□□□ -1.46
DHFR-204ENST00000508282 FCHO1O14526 889 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 FYB1O15117 783 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 COQ9O75208 318 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 NDST3O95803 873 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 ATP5F1P24539 256 aaPredicted RBP5.91□□□□□ -1.46
DHFR-204ENST00000508282 TM4SF4P48230 202 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 DNASE1L3Q13609 305 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 ETFDHQ16134 617 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 HSP90AB2PQ58FF8 381 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 MRNIPQ6NTE8 343 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 C11orf87Q6NUJ2 197 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 USP17L6PQ6QN14 398 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 DPP9Q86TI2 863 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 P3H2Q8IVL5 708 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 FAM71DQ8N9W8 422 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.91□□□□□ -1.46
DHFR-204ENST00000508282 RPL36ALQ969Q0 106 aaKnown RBP5.91□□□□□ -1.46
DHFR-204ENST00000508282 MAN2B2Q9Y2E5 1009 aa5.91□□□□□ -1.46
DHFR-204ENST00000508282 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 E5RJQ4 531 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 CCNT2O60583 730 aaKnown RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 CAND2O75155 1236 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 TMIGD3P0DMS9 266 aaPredicted RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 HARSP12081 509 aaKnown RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 TNFSF4P23510 183 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 SLC5A2P31639 672 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 GALNSP34059 522 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 CCDC15Q0P6D6 951 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 HNRNPA0Q13151 305 aaKnown RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 LONRF1Q17RB8 773 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 ARL13BQ3SXY8 428 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 FAM209BQ5JX69 171 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 TMTC4Q5T4D3 741 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 LRCH2Q5VUJ6 765 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 PAPD7Q5XG87 772 aaKnown RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 VSTM1Q6UX27 236 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 CCDC150Q8NCX0 1101 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 OSR1Q8TAX0 266 aaPredicted RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 PARD3BQ8TEW8 1205 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 ABHD5Q8WTS1 349 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 MAP4K1Q92918 833 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 SNX27Q96L92 541 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 FAM118BQ9BPY3 351 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 PCDHAC1Q9H158 963 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 TMEM8AQ9HCN3 771 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 TMOD4Q9NZQ9 345 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 SEMA5BQ9P283 1151 aa5.9□□□□□ -1.46
DHFR-204ENST00000508282 ZMYND8Q9ULU4 1186 aaPredicted RBP5.9□□□□□ -1.46
DHFR-204ENST00000508282 RASA4BC9J798 803 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 DSCR3O14972 297 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 RASA4O43374 803 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 FGF18O76093 207 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 TOP3BO95985 862 aaKnown RBP5.89□□□□□ -1.47
DHFR-204ENST00000508282 KCNJ12Q14500 433 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 SLC35G1Q2M3R5 365 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.89□□□□□ -1.47
DHFR-204ENST00000508282 C11orf96Q7Z7L8 435 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 TXLNBQ8N3L3 684 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 GLIS1Q8NBF1 620 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 SCARB1Q8WTV0 552 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 BRI3BPQ8WY22 251 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 HIC2Q96JB3 615 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 CCDC136Q96JN2 1154 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 RIPOR3Q96MK2 946 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 CINPQ9BW66 212 aaPredicted RBP5.89□□□□□ -1.47
DHFR-204ENST00000508282 ARNT2Q9HBZ2 717 aa5.89□□□□□ -1.47
DHFR-204ENST00000508282 FAM234BA2RU67 622 aa5.88□□□□□ -1.47
DHFR-204ENST00000508282 OR2W5A6NFC9 320 aa5.88□□□□□ -1.47
DHFR-204ENST00000508282 PRC1O43663 620 aa5.88□□□□□ -1.47
DHFR-204ENST00000508282 RNF8O76064 485 aa5.88□□□□□ -1.47
DHFR-204ENST00000508282 KRT18P05783 430 aaKnown RBP5.88□□□□□ -1.47
DHFR-204ENST00000508282 NBPF7P0C2Y1 421 aaPredicted RBP5.88□□□□□ -1.47
DHFR-204ENST00000508282 PECAM1P16284 738 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 541.2 ms