RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 PIK3CAP42336 1068 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 MXI1P50539 228 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 MRPS21P82921 87 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 CETN1Q12798 172 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 HNRNPDQ14103 355 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 SOWAHAQ2M3V2 549 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 WDR72Q3MJ13 1102 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 CFAP221Q4G0U5 840 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 ANKRD40Q6AI12 368 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 CC2D1AQ6P1N0 951 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 VSTM1Q6UX27 236 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 SV2AQ7L0J3 742 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 TMPRSS7Q7RTY8 843 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 ZNF843Q8N446 348 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 DEFB119Q8N690 84 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 PLEKHO2Q8TD55 490 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 SH3RF2Q8TEC5 729 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 NELFBQ8WX92 580 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 ZNF516Q92618 1163 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 TRMT2BQ96GJ1 504 aaKnown RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 TNIP3Q96KP6 325 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 SPACA7Q96KW9 195 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 MYRFLQ96LU7 910 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 MMS19Q96T76 1030 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 XYLT2Q9H1B5 865 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 SNX25Q9H3E2 840 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 CYP3A43Q9HB55 503 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 POLMQ9NP87 494 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 LMBRD1Q9NUN5 540 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 ABI2Q9NYB9 513 aaPredicted RBP9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 EHD2Q9NZN4 543 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 PCOLCE2Q9UKZ9 415 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 ATP8B3O60423 1300 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 COL6A6A6NMZ7 2263 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 MYLKQ15746 1914 aa9.76□□□□□ -0.85
UBE2D3-223ENST00000508249 UBR5O95071 2799 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 IGHV1OR15-9A0A0B4J2B8 117 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 PPP1R3GB7ZBB8 358 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 CLSTN1O94985 981 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 KLF8O95600 359 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 CST3P01034 146 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 HLA-DRAP01903 254 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 GABRG2P18507 467 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 GNL1P36915 607 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 MAGEA11P43364 429 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 SLC6A11P48066 632 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 IFNAR2P48551 515 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 MARSP56192 900 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 MYL6P60660 151 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 RPL10AP62906 217 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 GFPT1Q06210 699 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 ZNF33AQ06730 810 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 C19orf57Q0VDD7 668 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 SLC14A1Q13336 389 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 CCDC40Q4G0X9 1142 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 TTI2Q6NXR4 508 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 FAM171BQ6P995 826 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 UNC93AQ86WB7 457 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 TTC30AQ86WT1 665 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 SCUBE3Q8IX30 993 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 FBXL13Q8NEE6 735 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 CEP76Q8TAP6 659 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 KBTBD7Q8WVZ9 684 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 HMGB4Q8WW32 186 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 SLC39A7Q92504 469 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 MRPS31Q92665 395 aaKnown RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 ERCC4Q92889 916 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 SYT15Q9BQS2 421 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 PRORYQ9H606 182 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 UXTQ9UBK9 157 aaPredicted RBP9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 RWDD2AQ9UIY3 292 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 RAI2Q9Y5P3 530 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 NBPF19A0A087WUL8 3843 aa9.75□□□□□ -0.85
UBE2D3-223ENST00000508249 A0A0A0MRY4 1105 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 A0A1W2PQF6 199 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 TCRBV21S2A2A0A5A6 115 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 A8MXQ7 604 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 TK2O00142 265 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 VNN1O95497 513 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 CSH1P0DML2 217 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 CSH2P0DML3 217 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 BMP6P22004 513 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 ERCC5P28715 1186 aaPredicted RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 TIE1P35590 1138 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 DPP6P42658 865 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 GCLMP48507 274 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 YWHAEP62258 255 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 NOP14P78316 857 aaKnown RBP9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 DLG4P78352 724 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 BNC1Q01954 994 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 CYP4F3Q08477 520 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 GRIK2Q13002 908 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 TAF12Q16514 161 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 CAMK4Q16566 473 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 C1orf220Q5T0J3 134 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 TCERG1LQ5VWI1 586 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 SCARA3Q6AZY7 606 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 KLHL10Q6JEL2 608 aa9.74□□□□□ -0.85
UBE2D3-223ENST00000508249 MIB1Q86YT6 1006 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms