RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 P3H2Q8IVL5 708 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 SUGP1Q8IWZ8 645 aaKnown RBP4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 ULK2Q8IYT8 1036 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 SCAMP5Q8TAC9 235 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 ACTRT2Q8TDY3 377 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 OVCA2Q8WZ82 227 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 SLC9A6Q92581 669 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 ZSCAN31Q96LW9 406 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 TRAPPC9Q96Q05 1148 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 TTPALQ9BTX7 342 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 TAF1DQ9H5J8 278 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 DLL3Q9NYJ7 618 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 AMFRQ9UKV5 643 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 GTF2A1LQ9UNN4 478 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 MYRFQ9Y2G1 1151 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 SALL3Q9BXA9 1300 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 COL4A3Q01955 1670 aa4.67□□□□□ -1.66
HMGB1P28-201ENST00000507778 TMEM191CA6NGB0 347 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 TMPRSS11DO60235 418 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 PPP6R2O75170 966 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 FAM155BO75949 473 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 CER1O95813 267 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 EBLN1P0CF75 366 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ENGP17813 658 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ADRA1DP25100 572 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 PCSK6P29122 969 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ABHD18Q0P651 414 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 SEMA3BQ13214 749 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 BTBD16Q32M84 506 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ADCK5Q3MIX3 580 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 TRIM60Q495X7 471 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 AASDHQ4L235 1098 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 L1TD1Q5T7N2 865 aaKnown RBP4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ANKRD45Q5TZF3 282 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 FAM90A2PQ658T7 463 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 DENND2CQ68D51 928 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 GRHL2Q6ISB3 625 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 CCDC144NLQ6NUI1 221 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 MSANTD2Q6P1R3 559 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ANKRD16Q6P6B7 361 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 PIK3AP1Q6ZUJ8 805 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 PTCHD4Q6ZW05 846 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 KRT27Q7Z3Y8 459 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 TRABD2AQ86V40 505 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 CLASRPQ8N2M8 674 aaKnown RBP4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ABHD11Q8NFV4 315 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 OR6Y1Q8NGX8 325 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 SPPL3Q8TCT6 385 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 VPS16Q9H269 839 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 ELAC1Q9H777 363 aaKnown RBP4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 SEPSECSQ9HD40 501 aaKnown RBP4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 SNX15Q9NRS6 342 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 DUSP22Q9NRW4 184 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 RXFP3Q9NSD7 469 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 DAPP1Q9UN19 280 aa4.66□□□□□ -1.66
HMGB1P28-201ENST00000507778 GRID2IPA4D2P6 1211 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FAM90A18PA6NE21 464 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FAM90A16PA6NEW6 464 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FAM90A9PA6NNJ1 464 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 LINC00473A8K010 186 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FAM90A5PA8MXJ8 464 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 MATN3O15232 486 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 CTIFO43310 598 aaKnown RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 RPP40O75818 363 aaKnown RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 NPSP0C0P6 89 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FAM90A15PP0C7V4 464 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FAM90A14PP0C7W9 464 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 MYCLP12524 364 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ZNF37AP17032 561 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 MMP8P22894 467 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 PAX3P23760 479 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 MCM5P33992 734 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ADD2P35612 726 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 MAPK9P45984 424 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 EEFSECP57772 596 aaKnown RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 DEUP1Q05D60 604 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ZNF169Q14929 603 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 RPS6KA2Q15349 733 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ZXDCQ2QGD7 858 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 PCID2Q5JVF3 399 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ZNF569Q5MCW4 686 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 HECTD2Q5U5R9 776 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 CRIP3Q6Q6R5 217 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 RINLQ6ZS11 566 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 RRAGAQ7L523 313 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FTSJ3Q8IY81 847 aaKnown RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 BEND2Q8NDZ0 799 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 SLC22A17Q8WUG5 538 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 LARP4BQ92615 738 aaKnown RBP4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 C3orf49Q96BT1 292 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 SDCCAG3Q96C92 435 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 EVI5LQ96CN4 794 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 PDLIM2Q96JY6 352 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 PAAF1Q9BRP4 392 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 FBXO28Q9NVF7 368 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 SAGE1Q9NXZ1 904 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ASAP1Q9ULH1 1129 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ADAMTS5Q9UNA0 930 aa4.65□□□□□ -1.67
HMGB1P28-201ENST00000507778 ST3GAL5Q9UNP4 418 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms