RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ASB16Q96NS5 453 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 SLC2A13Q96QE2 648 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 MYADMQ96S97 322 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 CCSER2Q9H7U1 834 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 METTL5Q9NRN9 209 aaKnown RBP20.98■□□□□ 0.95
USP53-203ENST00000507597 SPTLC3Q9NUV7 552 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 THG1LQ9NWX6 298 aaKnown RBP20.98■□□□□ 0.95
USP53-203ENST00000507597 MARCH2Q9P0N8 246 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 IGSF9Q9P2J2 1179 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 RASAL2Q9UJF2 1139 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 LSM7Q9UK45 103 aaKnown RBP20.98■□□□□ 0.95
USP53-203ENST00000507597 ARHGAP26Q9UNA1 814 aa20.98■□□□□ 0.95
USP53-203ENST00000507597 HBS1LQ9Y450 684 aaKnown RBP20.98■□□□□ 0.95
USP53-203ENST00000507597 LCA5LO95447 670 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 TMEM253P0C7T8 217 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 IL9P15248 144 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 TCF3P15923 654 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 SDC4P31431 198 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 GALCP54803 685 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 EFEMP1Q12805 493 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 NNTQ13423 1086 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 C2CD6Q53TS8 623 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 PLEKHA7Q6IQ23 1121 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 OLIG1Q8TAK6 271 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 DCLK3Q9C098 648 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 UVRAGQ9P2Y5 699 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 MYO1AQ9UBC5 1043 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 SLC12A6Q9UHW9 1150 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 ZNF510Q9Y2H8 683 aa20.97■□□□□ 0.95
USP53-203ENST00000507597 SOWAHDA6NJG2 315 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 GRAP2O75791 330 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 SLC2A3P11169 496 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 STXBP5Q5T5C0 1151 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 CC2D1AQ6P1N0 951 aaPredicted RBP20.96■□□□□ 0.95
USP53-203ENST00000507597 HFE2Q6ZVN8 426 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 UNC45BQ8IWX7 931 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 RHOT2Q8IXI1 618 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 YAF2Q8IY57 180 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 DEPDC1BQ8WUY9 529 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 ELSPBP1Q96BH3 223 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 DDX23Q9BUQ8 820 aaKnown RBP20.96■□□□□ 0.95
USP53-203ENST00000507597 OSER1Q9NX31 292 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 TMEM59LQ9UK28 342 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 NAALADL1Q9UQQ1 740 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 SH3BP1Q9Y3L3 701 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 CPQQ9Y646 472 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 C2orf16Q68DN1 1984 aa20.96■□□□□ 0.95
USP53-203ENST00000507597 SLC12A8A0AV02 714 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 SLC9A3R1O14745 358 aaPredicted RBP20.95■□□□□ 0.94
USP53-203ENST00000507597 ECI2O75521 394 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 PDGFRAP16234 1089 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 GPD1P21695 349 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 HARS2P49590 506 aaKnown RBP20.95■□□□□ 0.94
USP53-203ENST00000507597 MAMLD1Q13495 774 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 SLC25A52Q3SY17 297 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 FAM78AQ5JUQ0 283 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 MIB1Q86YT6 1006 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 FEZF2Q8TBJ5 459 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 PLD4Q96BZ4 506 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 CYP2S1Q96SQ9 504 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 RNF38Q9H0F5 515 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 THAP2Q9H0W7 228 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 SMOC2Q9H3U7 446 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 NENFQ9UMX5 172 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 PCDHA13Q9Y5I0 950 aa20.95■□□□□ 0.94
USP53-203ENST00000507597 ZNF638Q14966 1978 aaKnown RBP20.95■□□□□ 0.94
USP53-203ENST00000507597 C2CD4DB7Z1M9 353 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 CYP1A2P05177 515 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 KCNQ1P51787 676 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 ACAP1Q15027 740 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 TAF5Q15542 800 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 NUGGCQ68CJ6 796 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 PHLDB2Q86SQ0 1253 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 KIAA1328Q86T90 577 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 BPIFB1Q8TDL5 484 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 DQX1Q8TE96 717 aaKnown RBP20.94■□□□□ 0.94
USP53-203ENST00000507597 FNIP1Q8TF40 1166 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 RNF34Q969K3 372 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 ZSWIM3Q96MP5 696 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 MCEEQ96PE7 176 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 FAM204AQ9H8W3 233 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 CTTNBP2NLQ9P2B4 639 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 TBC1D14Q9P2M4 693 aa20.94■□□□□ 0.94
USP53-203ENST00000507597 MYO16Q9Y6X6 1858 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 FAM170AA1A519 330 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 LOC730098B7Z3J9 87 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 MYO1FO00160 1098 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 RNF8O76064 485 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 TRUB2O95900 331 aaKnown RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 TBX18O95935 607 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 APOEP02649 317 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 FYNP06241 537 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 SP100P23497 879 aaPredicted RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 PTPN9P43378 593 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 PGFP49763 221 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 SULT1E1P49888 294 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 TBX4P57082 545 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 RING1Q06587 406 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 TRIP4Q15650 581 aaPredicted RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 TJAP1Q5JTD0 557 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms