RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 DTWD2Q8NBA8 298 aa20.24■□□□□ 0.83
LMNA-221ENST00000506981 IPO4Q8TEX9 1081 aaKnown RBP20.24■□□□□ 0.83
LMNA-221ENST00000506981 EDEM1Q92611 657 aa20.24■□□□□ 0.83
LMNA-221ENST00000506981 FAM149B1Q96BN6 582 aa20.24■□□□□ 0.83
LMNA-221ENST00000506981 TRIM62Q9BVG3 475 aa20.24■□□□□ 0.83
LMNA-221ENST00000506981 SLC4A5Q9BY07 1137 aa20.24■□□□□ 0.83
LMNA-221ENST00000506981 LHX5Q9H2C1 402 aa20.24■□□□□ 0.83
LMNA-221ENST00000506981 SYNCQ9H7C4 482 aa20.24■□□□□ 0.83
LMNA-221ENST00000506981 SLC12A8A0AV02 714 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 E5RJQ4 531 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 GFPT2O94808 682 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 HMBSP08397 361 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 GJA4P35212 333 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 SOX5P35711 763 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 RPL34P49207 117 aaKnown RBP20.23■□□□□ 0.83
LMNA-221ENST00000506981 TXNDC11Q6PKC3 985 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 HTR3DQ70Z44 454 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 BBS7Q8IWZ6 715 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 TMEM35BQ8NCS4 154 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 C1orf131Q8NDD1 294 aaKnown RBP20.23■□□□□ 0.83
LMNA-221ENST00000506981 CLEC4CQ8WTT0 213 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 DCLK3Q9C098 648 aa20.23■□□□□ 0.83
LMNA-221ENST00000506981 RTN4Q9NQC3 1192 aaKnown RBP20.23■□□□□ 0.83
LMNA-221ENST00000506981 CACNA1IQ9P0X4 2223 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 OTOL1A6NHN0 477 aaPredicted RBP20.22■□□□□ 0.83
LMNA-221ENST00000506981 SHISA7A6NL88 538 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 EPHB6O15197 1021 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 GABBR2O75899 941 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 CYP17A1P05093 508 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 RPS9P46781 194 aaKnown RBP20.22■□□□□ 0.83
LMNA-221ENST00000506981 GRSF1Q12849 480 aaKnown RBP eCLIP20.22■□□□□ 0.83
LMNA-221ENST00000506981 DHCR24Q15392 516 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 DGKKQ5KSL6 1271 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 TAF3Q5VWG9 929 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 ZNF677Q86XU0 584 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 SCUBE3Q8IX30 993 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 MSANTD4Q8NCY6 345 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 CLDN23Q96B33 292 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 PLD4Q96BZ4 506 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 PPP1R13BQ96KQ4 1090 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 LMAN1LQ9HAT1 526 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 RAPGEFL1Q9UHV5 662 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 CYTH4Q9UIA0 394 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 ZNF510Q9Y2H8 683 aa20.22■□□□□ 0.83
LMNA-221ENST00000506981 CAPN9O14815 690 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 STC2O76061 302 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 ADH5P11766 374 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 PTPN5P54829 565 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 JAM2P57087 298 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 TMEM110Q86TL2 294 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 FMNL3Q8IVF7 1028 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 ADGRG2Q8IZP9 1017 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 EPS8L1Q8TE68 723 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 CD101Q93033 1021 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 P2RY13Q9BPV8 354 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 IER2Q9BTL4 223 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 TSPY26PQ9H489 355 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 SPATA6Q9NWH7 488 aaPredicted RBP20.21■□□□□ 0.83
LMNA-221ENST00000506981 DLGAP2Q9P1A6 1054 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 HBS1LQ9Y450 684 aaKnown RBP20.21■□□□□ 0.83
LMNA-221ENST00000506981 ARIH1Q9Y4X5 557 aaPredicted RBP20.21■□□□□ 0.83
LMNA-221ENST00000506981 MUC6Q6W4X9 2439 aa20.21■□□□□ 0.83
LMNA-221ENST00000506981 A0A1B0GTH6 734 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 TRDMT1O14717 391 aaKnown RBP20.2■□□□□ 0.82
LMNA-221ENST00000506981 TEX33O43247 280 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 NCAM1P13591 858 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 GAD2Q05329 585 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 MSANTD2Q6P1R3 559 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 NOP9Q86U38 636 aaKnown RBP20.2■□□□□ 0.82
LMNA-221ENST00000506981 PRSS33Q8NF86 280 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 WBP2Q969T9 261 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 CPXM1Q96SM3 734 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 SPHK2Q9NRA0 654 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 SFMBT1Q9UHJ3 866 aa20.2■□□□□ 0.82
LMNA-221ENST00000506981 A0A1W2PQC6 194 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 PAPSS1O43252 624 aaPredicted RBP20.19■□□□□ 0.82
LMNA-221ENST00000506981 LSM8O95777 96 aaKnown RBP20.19■□□□□ 0.82
LMNA-221ENST00000506981 CCDC172P0C7W6 258 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 CHRNB1P11230 501 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 DRD1P21728 446 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 CORO1AP31146 461 aaKnown RBP20.19■□□□□ 0.82
LMNA-221ENST00000506981 FANCCQ00597 558 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 ANO4Q32M45 955 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 TMEM196Q5HYL7 178 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 LY6G5CQ5SRR4 150 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 OR6B2Q6IFH4 312 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 TOGARAM2Q6ZUX3 1019 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 ZNF687Q8N1G0 1237 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 WDTC1Q8N5D0 677 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 CHRDQ9H2X0 955 aa20.19■□□□□ 0.82
LMNA-221ENST00000506981 LAMTOR5O43504 91 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 MMEP08473 750 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 CDH5P33151 784 aaPredicted RBP20.18■□□□□ 0.82
LMNA-221ENST00000506981 HARS2P49590 506 aaKnown RBP20.18■□□□□ 0.82
LMNA-221ENST00000506981 GALK1P51570 392 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 EFHC1Q5JVL4 640 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 RHBDF2Q6PJF5 856 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 LRSAM1Q6UWE0 723 aa20.18■□□□□ 0.82
LMNA-221ENST00000506981 Q6ZNB5 142 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms