RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 TBX18O95935 607 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 CDH5P33151 784 aaPredicted RBP20.81■□□□□ 0.92
SNX25-204ENST00000506896 IFNAR2P48551 515 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 ANGPT1Q15389 498 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 ITPRIPL2Q3MIP1 535 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 NOP9Q86U38 636 aaKnown RBP20.81■□□□□ 0.92
SNX25-204ENST00000506896 PASD1Q8IV76 773 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 SCUBE3Q8IX30 993 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 WDTC1Q8N5D0 677 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 RNF139Q8WU17 664 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 PPP1R13BQ96KQ4 1090 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 NUP58Q9BVL2 599 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 EDEM3Q9BZQ6 932 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 FAM86C1Q9NVL1 165 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 TBC1D14Q9P2M4 693 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 CYTH4Q9UIA0 394 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 STRIP2Q9ULQ0 834 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 MRPS17Q9Y2R5 130 aaKnown RBP20.81■□□□□ 0.92
SNX25-204ENST00000506896 SH3BP1Q9Y3L3 701 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 PIAS3Q9Y6X2 628 aa20.81■□□□□ 0.92
SNX25-204ENST00000506896 PIK3R2O00459 728 aa20.8■□□□□ 0.92
SNX25-204ENST00000506896 KPNA1P52294 538 aaPredicted RBP20.8■□□□□ 0.92
SNX25-204ENST00000506896 COG7P83436 770 aa20.8■□□□□ 0.92
SNX25-204ENST00000506896 FIGNQ5HY92 759 aa20.8■□□□□ 0.92
SNX25-204ENST00000506896 ALYREFQ86V81 257 aaKnown RBP20.8■□□□□ 0.92
SNX25-204ENST00000506896 C1orf131Q8NDD1 294 aaKnown RBP20.8■□□□□ 0.92
SNX25-204ENST00000506896 IPO4Q8TEX9 1081 aaKnown RBP20.8■□□□□ 0.92
SNX25-204ENST00000506896 NDRG1Q92597 394 aaKnown RBP20.8■□□□□ 0.92
SNX25-204ENST00000506896 OTUB2Q96DC9 234 aa20.8■□□□□ 0.92
SNX25-204ENST00000506896 IQCDQ96DY2 449 aa20.8■□□□□ 0.92
SNX25-204ENST00000506896 KLF16Q9BXK1 252 aaPredicted RBP20.8■□□□□ 0.92
SNX25-204ENST00000506896 MIS12Q9H081 205 aa20.8■□□□□ 0.92
SNX25-204ENST00000506896 NOCTQ9UK39 431 aaKnown RBP20.8■□□□□ 0.92
SNX25-204ENST00000506896 E5RJQ4 531 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 PROB1E7EW31 1015 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 LTFP02788 710 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 FERP16591 822 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 MAGEA9P43362 315 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 RPS9P46781 194 aaKnown RBP20.79■□□□□ 0.92
SNX25-204ENST00000506896 AMPD2Q01433 879 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 CDR2Q01850 454 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 RUNX3Q13761 415 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 EML3Q32P44 896 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 TAF3Q5VWG9 929 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 BEND5Q7L4P6 421 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 RALGPS2Q86X27 583 aaPredicted RBP20.79■□□□□ 0.92
SNX25-204ENST00000506896 C1orf210Q8IVY1 113 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 CPA6Q8N4T0 437 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 MSANTD4Q8NCY6 345 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 RNF214Q8ND24 703 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 FAM3CQ92520 227 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 CPXM1Q96SM3 734 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 EBF3Q9H4W6 596 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 SYNCQ9H7C4 482 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 GTSE1Q9NYZ3 720 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 MARCH2Q9P0N8 246 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 IFNKQ9P0W0 207 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 LSM7Q9UK45 103 aaKnown RBP20.79■□□□□ 0.92
SNX25-204ENST00000506896 NUDT5Q9UKK9 219 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 WNT6Q9Y6F9 365 aa20.79■□□□□ 0.92
SNX25-204ENST00000506896 NCAM2O15394 837 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 PAPSS1O43252 624 aaPredicted RBP20.78■□□□□ 0.92
SNX25-204ENST00000506896 CBFA2T2O43439 604 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 NFATC1O95644 943 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 MMEP08473 750 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 PBX1P40424 430 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 NBL1P41271 181 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 MRE11P49959 708 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 TNK2Q07912 1038 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 EFEMP1Q12805 493 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 NR1H3Q13133 447 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 TRIM68Q6AZZ1 485 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 TRIM72Q6ZMU5 477 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 HTR3DQ70Z44 454 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 MIB1Q86YT6 1006 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 ZDHHC17Q8IUH5 632 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 MAML2Q8IZL2 1156 aaPredicted RBP20.78■□□□□ 0.92
SNX25-204ENST00000506896 CLEC4CQ8WTT0 213 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 BAP1Q92560 729 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 HPS4Q9NQG7 708 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 RASAL2Q9UJF2 1139 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 FANCMQ8IYD8 2048 aa20.78■□□□□ 0.92
SNX25-204ENST00000506896 ZFHX2Q9C0A1 2572 aaPredicted RBP20.77■□□□□ 0.92
SNX25-204ENST00000506896 MDM4O15151 490 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 GLI1P08151 1106 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 SOX9P48436 509 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 MSANTD2Q6P1R3 559 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 EDEM1Q92611 657 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 FAM149B1Q96BN6 582 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 TTYH3Q9C0H2 523 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 ECT2Q9H8V3 914 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 ZNF510Q9Y2H8 683 aa20.77■□□□□ 0.92
SNX25-204ENST00000506896 HBS1LQ9Y450 684 aaKnown RBP20.77■□□□□ 0.92
SNX25-204ENST00000506896 A0A1W2PQJ5 194 aa20.76■□□□□ 0.91
SNX25-204ENST00000506896 SPECC1L-ADORA2AF8WAN1 911 aa20.76■□□□□ 0.91
SNX25-204ENST00000506896 IRF1P10914 325 aa20.76■□□□□ 0.91
SNX25-204ENST00000506896 ARSAP15289 507 aa20.76■□□□□ 0.91
SNX25-204ENST00000506896 CTHP32929 405 aa20.76■□□□□ 0.91
SNX25-204ENST00000506896 YWHAZP63104 245 aaKnown RBP20.76■□□□□ 0.91
SNX25-204ENST00000506896 ARID5AQ03989 594 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms