RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SYTL1Q8IYJ3 562 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 CLASRPQ8N2M8 674 aaKnown RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 FSTL5Q8N475 847 aaPredicted RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 TERB1Q8NA31 727 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 HASPINQ8TF76 798 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 DAZAP1Q96EP5 407 aaKnown RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 EDC3Q96F86 508 aaKnown RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 ZNF764Q96H86 408 aaPredicted RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 CIPCQ9C0C6 399 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 SNX15Q9NRS6 342 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 SEMA5BQ9P283 1151 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 LPAR3Q9UBY5 353 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 CCNL1Q9UK58 526 aaPredicted RBP3.41□□□□□ -1.86
GYPB-207ENST00000506679 CEP83Q9Y592 693 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 SPATA31A6Q5VVP1 1343 aa3.41□□□□□ -1.86
GYPB-207ENST00000506679 LINC01548A6NM66 108 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 SUV39H1O43463 412 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 RBMXL2O75526 392 aaKnown RBP3.4□□□□□ -1.87
GYPB-207ENST00000506679 C1RP00736 705 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 VIPP01282 170 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 PDIA3P30101 505 aaKnown RBP3.4□□□□□ -1.87
GYPB-207ENST00000506679 PBX1P40424 430 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 TECP42680 631 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 DGKQP52824 942 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 GPC5P78333 572 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 CFHR3Q02985 330 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 GALNT1Q10472 559 aaPredicted RBP3.4□□□□□ -1.87
GYPB-207ENST00000506679 DNASE1L3Q13609 305 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 STARD3Q14849 445 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 TRIM71Q2Q1W2 868 aaKnown RBP3.4□□□□□ -1.87
GYPB-207ENST00000506679 TMEM63BQ5T3F8 832 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 DENND2CQ68D51 928 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 SUMO4Q6EEV6 95 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 PIK3AP1Q6ZUJ8 805 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 PTF1AQ7RTS3 328 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 SKAP1Q86WV1 359 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 DNAJC10Q8IXB1 793 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 IPO4Q8TEX9 1081 aaKnown RBP3.4□□□□□ -1.87
GYPB-207ENST00000506679 RITA1Q96K30 269 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 RPS6KC1Q96S38 1066 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 CRB3Q9BUF7 120 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 FSCN3Q9NQT6 498 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 VPS45Q9NRW7 570 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 HELLSQ9NRZ9 838 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 MGAT4CQ9UBM8 478 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 DAAM1Q9Y4D1 1078 aa3.4□□□□□ -1.87
GYPB-207ENST00000506679 TISP43B9A030 160 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 BTBD19C9JJ37 291 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 NPC1O15118 1278 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 FFAR2O15552 330 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 CA12O43570 354 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 PRAMEF2O60811 474 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 MT-CO3P00414 261 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 ITGA5P08648 1049 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 CHRM5P08912 532 aaPredicted RBP3.39□□□□□ -1.87
GYPB-207ENST00000506679 NPPBP16860 134 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 PTK2BQ14289 1009 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 LARS2Q15031 903 aaKnown RBP3.39□□□□□ -1.87
GYPB-207ENST00000506679 TMEM196Q5HYL7 178 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 C12orf76Q8N812 135 aaPredicted RBP3.39□□□□□ -1.87
GYPB-207ENST00000506679 SEMA6DQ8NFY4 1073 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 FAM71BQ8TC56 605 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 ZNF398Q8TD17 642 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 OVCA2Q8WZ82 227 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 DPF1Q92782 380 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 PMM1Q92871 262 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 MUL1Q969V5 352 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 GRAMD1AQ96CP6 724 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 PAAF1Q9BRP4 392 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 TP63Q9H3D4 680 aaPredicted RBP3.39□□□□□ -1.87
GYPB-207ENST00000506679 SAP30LQ9HAJ7 183 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 KCNK9Q9NPC2 374 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 SH3BP4Q9P0V3 963 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 FZD4Q9ULV1 537 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 LRCH1Q9Y2L9 728 aa3.39□□□□□ -1.87
GYPB-207ENST00000506679 CGB1A6NKQ9 187 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 LGALS16A8MUM7 142 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 POC1B-GALNT4F8VUJ3 575 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 J3KTA2 159 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 SYT5O00445 386 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 PIP5K1BO14986 540 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 ZSCAN9O15535 394 aaPredicted RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 CTIFO43310 598 aaKnown RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 EXOC3O60645 756 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 TAF5LO75529 589 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 PRKCGP05129 697 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 ANXA6P08133 673 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 TXNL4AP83876 142 aaKnown RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 BIRC2Q13490 618 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 SPARCL1Q14515 664 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 FAM187BQ17R55 369 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 TRIM60Q495X7 471 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 C4orf46Q504U0 113 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 MSANTD2Q6P1R3 559 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 PGBD2Q6P3X8 592 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 C1orf228Q6PIY5 440 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 ZNF782Q6ZMW2 699 aaPredicted RBP3.38□□□□□ -1.87
GYPB-207ENST00000506679 CHSY1Q86X52 802 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 RASGRP3Q8IV61 690 aa3.38□□□□□ -1.87
GYPB-207ENST00000506679 GALNT4Q8N4A0 578 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms