RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 GOLGA8FQ08AF8 430 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 GOLGA8DPQ0D2H9 430 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 GOLGA7BQ2TAP0 167 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 HSF5Q4G112 596 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 C2orf27AQ580R0 203 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 C10orf120Q5SQS8 335 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 LCLAT1Q6UWP7 414 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 PRR23BQ6ZRT6 265 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 TADA2BQ86TJ2 420 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 RASSF3Q86WH2 238 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 ARHGEF19Q8IW93 802 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 SCML4Q8N228 414 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 ARHGAP18Q8N392 663 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 FAM160A2Q8N612 972 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 IL17RCQ8NAC3 791 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 KCTD13Q8WZ19 329 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 TFAP2BQ92481 460 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 P2RY11Q96G91 374 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 ZC3H10Q96K80 434 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 SRRTQ9BXP5 876 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 ULBP1Q9BZM6 244 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 ARHGEF4Q9NR80 690 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 DLL3Q9NYJ7 618 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 HCN2Q9UL51 889 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 CNTN6Q9UQ52 1028 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 FRYLO94915 3013 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 RPP40O75818 363 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 GABBR2O75899 941 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 AFPP02771 609 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 KLKB1P03952 638 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 SETSIPP0DME0 302 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CD19P15391 556 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 SEC13P55735 322 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC8A3P57103 927 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 YWHAGP61981 247 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 COG7P83436 770 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 KDSRQ06136 332 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CETN1Q12798 172 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CNGA2Q16280 664 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CRY1Q16526 586 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CAMK4Q16566 473 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 EMC10Q5UCC4 262 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 BTBD8Q5XKL5 378 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 TMEM270Q6UE05 265 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 TMEM92Q6UXU6 159 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CLEC17AQ6ZS10 378 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CEP68Q76N32 757 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CACNA2D4Q7Z3S7 1137 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 KBTBD6Q86V97 674 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 IRF2BP1Q8IU81 584 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 PPM1KQ8N3J5 372 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 ALLCQ8N6M5 410 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 TERB1Q8NA31 727 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 EHBP1Q8NDI1 1231 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC35F5Q8WV83 523 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 LOXL4Q96JB6 756 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 CNOT6LQ96LI5 555 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 KREMEN1Q96MU8 473 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 DEC1Q9P2X7 70 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 HESX1Q9UBX0 185 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 RWDD2AQ9UIY3 292 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 LSM7Q9UK45 103 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 FBXO10Q9UK96 956 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 PCDHB4Q9Y5E5 795 aa9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDLIM5-209ENST00000506632 DMXL1Q9Y485 3027 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 PRR5-ARHGAP8B1AHC4 643 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 NEDD8-MDP1E9PL57 170 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 SGK1O00141 431 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 TRIM24O15164 1050 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 ADAM23O75077 832 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 EPN2O95208 641 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 KLF8O95600 359 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 FGFR1OPO95684 399 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 PENKP01210 267 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 CISD3P0C7P0 127 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 CCDC192P0DO97 292 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 TYRP14679 529 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 TIE1P35590 1138 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 DGKEP52429 567 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 DAOAP59103 153 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 ARHGAP8P85298 464 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 LMNB2Q03252 620 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 ADIGQ0VDE8 80 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 EFEMP1Q12805 493 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 PUM1Q14671 1186 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 STILQ15468 1287 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 TRIP4Q15650 581 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 CSRP2Q16527 193 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 ANO4Q32M45 955 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 PLK5Q496M5 336 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 PREPLQ4J6C6 727 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 TPGS1Q6ZTW0 290 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 RRAGAQ7L523 313 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 ERMP1Q7Z2K6 904 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 MIB1Q86YT6 1006 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms