RNA–Protein interactions for RNA: ENST00000506556.1

THUMPD3P1-201, Transcript of THUMP domain containing 3 pseudogene 1, humanhuman

BASIC

Gene THUMPD3P1, Length 1,480 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3P1-201ENST00000506556 NACADO15069 1562 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 GRID2IPA4D2P6 1211 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 QSOX1O00391 747 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 FCHO1O14526 889 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 PCDH17O14917 1159 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 IRAK2O43187 625 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 TIMM44O43615 452 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 USP1O94782 785 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 RHOBTB3O94955 611 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 TNFRSF6BO95407 300 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 VNN1O95497 513 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 HSD3B1P14060 373 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 TNFRSF1AP19438 455 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 CALRP27797 417 aaKnown RBP4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 MPLP40238 635 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 GSTM5P46439 218 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 BIRC3Q13489 604 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 PUM1Q14671 1186 aaKnown RBP eCLIP4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 KCTD2Q14681 263 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 ERCC6LQ2NKX8 1250 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 TMEM63BQ5T3F8 832 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 HECTD2Q5U5R9 776 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 ZKSCAN2Q63HK3 967 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 PTCHD4Q6ZW05 846 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 Q6ZWC4 215 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 ZNF354CQ86Y25 554 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 C11orf44Q8N8P7 122 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 ABHD11Q8NFV4 315 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 NEU4Q8WWR8 484 aaPredicted RBP4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 OVCA2Q8WZ82 227 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 LARP4BQ92615 738 aaKnown RBP4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 EIF3CQ99613 913 aaKnown RBP4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 RTKNQ9BST9 563 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 SNX15Q9NRS6 342 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 DUSP22Q9NRW4 184 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 RXFP3Q9NSD7 469 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 GRHPRQ9UBQ7 328 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 AMFRQ9UKV5 643 aa4.28□□□□□ -1.72
THUMPD3P1-201ENST00000506556 CES2O00748 559 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ACTL6BO94805 426 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ERBB2P04626 1255 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 MYCLP12524 364 aaPredicted RBP4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 C6P13671 934 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CREB1P16220 341 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ADRA1DP25100 572 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 YY1P25490 414 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ADRA1BP35368 520 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 TERF1P54274 439 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 AP2B1P63010 937 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 SIM2Q14190 667 aaPredicted RBP4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 FAM153CQ494X1 144 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 AARS2Q5JTZ9 985 aaKnown RBP4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 LAIR1Q6GTX8 287 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 RINT1Q6NUQ1 792 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 LDHAL6AQ6ZMR3 332 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 DBX2Q6ZNG2 339 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 RAB11FIP2Q7L804 512 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 VRK3Q8IV63 474 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 P3H2Q8IVL5 708 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CLASRPQ8N2M8 674 aaKnown RBP4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 TTC30BQ8N4P2 665 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 AMER2Q8N7J2 671 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 BEND2Q8NDZ0 799 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 PRR25Q96S07 402 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 EPS8L2Q9H6S3 715 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ANAPC4Q9UJX5 808 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 PACSIN3Q9UKS6 424 aa4.27□□□□□ -1.73
THUMPD3P1-201ENST00000506556 EFCAB8A8MWE9 144 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 DNPH1O43598 174 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CBFA2T3O75081 653 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 EBLN1P0CF75 366 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 DHRS4L1P0CG22 281 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 VEGFAP15692 232 aaPredicted RBP4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ENGP17813 658 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 MMP8P22894 467 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 PCSK6P29122 969 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CTGFP29279 349 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CYP2C18P33260 490 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 BUD31P41223 144 aaPredicted RBP4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CCT8P50990 548 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ARL4CP56559 192 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 EEFSECP57772 596 aaKnown RBP4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 TXNL4AP83876 142 aaKnown RBP4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 E2F1Q01094 437 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 FOXI1Q12951 378 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 PPFIA1Q13136 1202 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 FHL3Q13643 280 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ZNF169Q14929 603 aaPredicted RBP4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CYP1B1Q16678 543 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 SLC4A8Q2Y0W8 1093 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 P3H1Q32P28 736 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 IGFL4Q6B9Z1 124 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 SULT6B1Q6IMI4 303 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 SLC44A2Q8IWA5 706 aaPredicted RBP4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 SFTPA1Q8IWL2 248 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 METTL25Q8N6Q8 603 aa4.26□□□□□ -1.73
THUMPD3P1-201ENST00000506556 CAGE1Q8TC20 777 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms