RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 RTN4RL1Q86UN2 441 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 TRIML2Q8N7C3 387 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 TOR1AIP2Q8NFQ8 470 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 OR7D4Q8NG98 312 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SPATA20Q8TB22 786 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GRAPLQ8TC17 118 aaPredicted RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SEC14L1Q92503 715 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 WBP1Q96G27 269 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 ZSWIM3Q96MP5 696 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CARD6Q9BX69 1037 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 CCSER1Q9C0I3 900 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SDHAF3Q9NRP4 125 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GKN1Q9NS71 199 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 KRT82Q9NSB4 513 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 DZANK1Q9NVP4 752 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 HAUS2Q9NVX0 235 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 NAGPAQ9UK23 515 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 RABGAP1Q9Y3P9 1069 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 MAST3O60307 1309 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF532Q9HCE3 1301 aa2.38□□□□□ -2.03
NEDD4-205ENST00000506154 GOLGB1Q14789 3259 aaKnown RBP2.38□□□□□ -2.03
NEDD4-205ENST00000506154 SHISA3A0PJX4 238 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TISP43B9A030 160 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 B9A039 149 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 RASA4BC9J798 803 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GOLGA8MH3BSY2 632 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 IFNL4K9M1U5 179 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CLOCKO15516 846 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 RASA4O43374 803 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 VPS4BO75351 444 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PTBP3O95758 552 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ECDO95905 644 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 F2P00734 622 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 FDPSP14324 419 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 POLR2FP61218 127 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TUBA3CQ13748 450 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GFOD2Q3B7J2 385 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 KRBOX4Q5JUW0 171 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 XKR5Q6UX68 686 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CCNI2Q6ZMN8 369 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ADGRG6Q86SQ4 1221 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PTRH1Q86Y79 214 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 HACE1Q8IYU2 909 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 LHFPL5Q8TAF8 219 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 NRG4Q8WWG1 115 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CELF1Q92879 486 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 NSUN4Q96CB9 384 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TLCD1Q96CP7 247 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CYFIP2Q96F07 1278 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 DESI2Q9BSY9 194 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 OSBPL1AQ9BXW6 950 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SENP6Q9GZR1 1112 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 KIAA1683Q9H0B3 1180 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 DPEP3Q9H4B8 488 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TRPC7Q9HCX4 862 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 AASSQ9UDR5 926 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 HOOK1Q9UJC3 728 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CRYL1Q9Y2S2 319 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 IFT52Q9Y366 437 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 FUOMA2VDF0 154 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GOLGA6L10A6NI86 522 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 LRRC72A6NJI9 287 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 OR6C65A6NJZ3 312 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 H0Y8X5 98 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GOLGA6L19H0YKK7 550 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 BUD23O43709 281 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 EFCAB14O75071 495 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ADAMTS2O95450 1211 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GOT2P00505 430 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CD86P42081 329 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CCR10P46092 362 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PPP2R3AQ06190 1150 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 GRSF1Q12849 480 aaKnown RBP eCLIP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ADGRE1Q14246 886 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ITIH4Q14624 930 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 RRP1BQ14684 758 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ZC2HC1CQ53FD0 456 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 FAM91A1Q658Y4 838 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 METTL2BQ6P1Q9 378 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SEPT14Q6ZU15 432 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TRAPPC11Q7Z392 1133 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 TSPYL5Q86VY4 417 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CEP97Q8IW35 865 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 FBXL6Q8N531 539 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 KDF1Q8NAX2 398 aaPredicted RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 LILRB4Q8NHJ6 448 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SPATA18Q8TC71 538 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 AHCYL2Q96HN2 611 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 BIRC8Q96P09 236 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CCT8L2Q96SF2 557 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 AP1M1Q9BXS5 423 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 B3GNT5Q9BYG0 378 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SUV39H2Q9H5I1 410 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CAAP1Q9H8G2 361 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 CYP4F11Q9HBI6 524 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 NCOA5Q9HCD5 579 aaKnown RBP2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SYTL2Q9HCH5 934 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 SACM1LQ9NTJ5 587 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 ETNK2Q9NVF9 386 aa2.37□□□□□ -2.03
NEDD4-205ENST00000506154 PHTF1Q9UMS5 762 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms