RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TEX13CA0A0J9YWL9 993 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 KRT87PA6NCN2 255 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 AGAP5A6NIR3 686 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 LIPT2A6NK58 231 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SH2D7A6NKC9 451 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CTDSP2O14595 271 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GNB5O14775 395 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 WDR46O15213 610 aaKnown RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 KERAO60938 352 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PPFIA2O75334 1257 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 DBHP09172 617 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 MYBL1P10243 752 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 FDPSP14324 419 aaKnown RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SP100P23497 879 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 MAPK3P27361 379 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC5A2P31639 672 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 BSGP35613 385 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GP5P40197 560 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GARSP41250 739 aaKnown RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GPD2P43304 727 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GSTM5P46439 218 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 TDO2P48775 406 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CDH8P55286 799 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 UBASH3AP57075 661 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 RPL7AP62424 266 aaKnown RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRAMEP78395 509 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PRR5P85299 388 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CHRNEQ04844 493 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 YWHAHQ04917 246 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SP140Q13342 867 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 TNFAIP1Q13829 316 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SEMA3AQ14563 771 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 IQCB1Q15051 598 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PPA1Q15181 289 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 TBRG1Q3YBR2 411 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GLIPR1L2Q4G1C9 344 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SETMARQ53H47 684 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 KRTCAP3Q53RY4 240 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CBWD5Q5RIA9 395 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PLEKHS1Q5SXH7 462 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 MANEALQ5VSG8 457 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GARNL3Q5VVW2 1013 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 KANK2Q63ZY3 851 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 ADALQ6DHV7 355 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 TATDN1Q6P1N9 297 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 C11orf88Q6PI97 169 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 LYPD4Q6UWN0 246 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 UNC5DQ6UXZ4 953 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 DENND5BQ6ZUT9 1274 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF365Q70YC5 407 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CHST9Q7L1S5 443 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 RRM2BQ7LG56 351 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CCDC186Q7Z3E2 898 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC9B2Q86UD5 537 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 DNAAF5Q86Y56 855 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 FAM126BQ8IXS8 530 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CCDC105Q8IYK2 499 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 RTKN2Q8IZC4 609 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 FSTL5Q8N475 847 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 ZNF366Q8N895 744 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 POC5Q8NA72 575 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 POGLUT1Q8NBL1 392 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 ANKRD20A12PQ8NF67 263 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 LILRB1Q8NHL6 650 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CTCFLQ8NI51 663 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SETD6Q8TBK2 473 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 NETO1Q8TDF5 533 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 BPIFB1Q8TDL5 484 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SH3RF3Q8TEJ3 882 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 HSPH1Q92598 858 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GCDHQ92947 438 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 ATP6V0A1Q93050 837 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PGAP3Q96FM1 320 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CABS1Q96KC9 395 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 MEGF10Q96KG7 1140 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PHACTR3Q96KR7 559 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 CCDC114Q96M63 670 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SLC46A1Q96NT5 459 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 LENG8Q96PV6 779 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PPP1R10Q96QC0 940 aaKnown RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 HIST1H2AAQ96QV6 131 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 NACC1Q96RE7 527 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 ABHD1Q96SE0 405 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 MRI1Q9BV20 369 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 SPATA5L1Q9BVQ7 753 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 HAPLN2Q9GZV7 340 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 GSTO2Q9H4Y5 243 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 TTC12Q9H892 705 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 FSCN3Q9NQT6 498 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 DECR2Q9NUI1 292 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 PPP1R14DQ9NXH3 145 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 KCND2Q9NZV8 630 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 JKAMPQ9P055 326 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 POGKQ9P215 609 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 EPS15L1Q9UBC2 864 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 DNAJB11Q9UBS4 358 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 Q9UFV3 132 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 HOOK1Q9UJC3 728 aaKnown RBP3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 MKL2Q9ULH7 1088 aa3.9□□□□□ -1.79
HMGB1P22-201ENST00000505315 KLHL20Q9Y2M5 609 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms