RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CES2O00748 559 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 SEPT4O43236 478 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 VNN1O95497 513 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 OR4Q2P0C623 313 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 FLT3P36888 993 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ELK3P41970 407 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 TUBP50607 506 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 AENQ8WTP8 325 aaKnown RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 RBM22Q9NW64 420 aaKnown RBP eCLIP14.57□□□□□ -0.084e-6■■■■□ 24.3
TCOF1-207ENST00000504761 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 TTLL13PA6NNM8 815 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 PPARGP37231 505 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ELAVL2Q12926 359 aaKnown RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ZNF177Q13360 481 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 BMPR2Q13873 1038 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 FRA10AC1Q70Z53 315 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 ZDHHC17Q8IUH5 632 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 TMEM86AQ8N2M4 240 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 CAVIN3Q969G5 261 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 NT5MQ9NPB1 228 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 SMG5Q9UPR3 1016 aaKnown RBP14.57□□□□□ -0.08
TCOF1-207ENST00000504761 MYH1P12882 1939 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 AKAP11Q9UKA4 1901 aa14.57□□□□□ -0.08
TCOF1-207ENST00000504761 TRUB2O95900 331 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 CHRNB2P17787 502 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 YWHAQP27348 245 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 RABGGTBP53611 331 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 ARMC2Q8NEN0 867 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 PCYT2Q99447 389 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 LPIN3Q9BQK8 851 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 ENTPD7Q9NQZ7 604 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 GDF3Q9NR23 364 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 ZFP69BQ9UJL9 534 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 VANGL2Q9ULK5 521 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 MARF1Q9Y4F3 1742 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 TMEM191CA6NGB0 347 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 BTNL10A8MVZ5 291 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 O00370 1275 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 TSPAN3O60637 253 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 CILPO75339 1184 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 SNAI1O95863 264 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 WEE1P30291 646 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 RAD23BP54727 409 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 SKIV2LQ15477 1246 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 TRIM68Q6AZZ1 485 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 KAT2BQ92831 832 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 WNT8BQ93098 351 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 MYLPFQ96A32 169 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 RSRC1Q96IZ7 334 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 FAM111AQ96PZ2 611 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 RNF39Q9H2S5 420 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 TXLNGQ9NUQ3 528 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 ARHGEF38Q9NXL2 777 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 HACD3Q9P035 362 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 NOCTQ9UK39 431 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 APOC4-APOC2K7ER74 178 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 MYO1CO00159 1063 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 DNALI1O14645 258 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 APOC2P02655 101 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 TBX4P57082 545 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 DDR2Q16832 855 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 DDX53Q86TM3 631 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 MRPS31Q92665 395 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 ELMO2Q96JJ3 720 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 HSFY1Q96LI6 401 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 TMBIM4Q9HC24 238 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 AAASQ9NRG9 546 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 USP54Q70EL1 1684 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 A0A1B0GUA9 196 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 NOS2P35228 1153 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 IFI35P80217 286 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 RBBP5Q15291 538 aaKnown RBP14.56□□□□□ -0.08
TCOF1-207ENST00000504761 ILDR2Q71H61 639 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 SPATA21Q7Z572 469 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 CRYGNQ8WXF5 182 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 SERPINB12Q96P63 405 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 TASP1Q9H6P5 420 aa14.56□□□□□ -0.08
TCOF1-207ENST00000504761 NWD2Q9ULI1 1742 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 LOC102724159A0A0B4J2E5 919 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 SDR42E2A6NKP2 422 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 CBX4O00257 560 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 RIPK2O43353 540 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 SNX2O60749 519 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 DCTN3O75935 186 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 CLCNKBP51801 687 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 PWP2Q15269 919 aaKnown RBP14.55□□□□□ -0.08
TCOF1-207ENST00000504761 TAF5Q15542 800 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 HTR3CQ8WXA8 447 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 PAFAH2Q99487 392 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 DPEP3Q9H4B8 488 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 NR2E1Q9Y466 385 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 MYH6P13533 1939 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-207ENST00000504761 CFHP08603 1231 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 SPRP35270 261 aaPredicted RBP14.55□□□□□ -0.08
TCOF1-207ENST00000504761 FDFT1P37268 417 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 PCBP1Q15365 356 aaKnown RBP eCLIP14.55□□□□□ -0.08
TCOF1-207ENST00000504761 EGFL8Q99944 293 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 ETNK1Q9HBU6 452 aa14.55□□□□□ -0.08
TCOF1-207ENST00000504761 OR12D3Q9UGF7 316 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms