RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 IFT20Q8IY31 132 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 VPS52Q8N1B4 723 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 EIF1ADQ8N9N8 165 aaKnown RBP12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 SCAMP5Q8TAC9 235 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 ZNF461Q8TAF7 563 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 NDRG1Q92597 394 aaKnown RBP12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 SLCO2A1Q92959 643 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 CALN1Q9BXU9 219 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 MAK16Q9BXY0 300 aaKnown RBP12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 RAB17Q9H0T7 212 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 ZBP1Q9H171 429 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 CXXC1Q9P0U4 656 aaPredicted RBP12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 AP4E1Q9UPM8 1137 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 NAALADL1Q9UQQ1 740 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 LZTS1Q9Y250 596 aa12.44□□□□□ -0.42
POLR2J3-210ENST00000504677 C2CD2LO14523 706 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 ABLIM3O94929 683 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 HEXIM1O94992 359 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 VNN2O95498 520 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 ECEL1O95672 775 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 CTSAP10619 480 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 ATF2P15336 505 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 ZFXP17010 805 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 SYN1P17600 705 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 TFE3P19532 575 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 COILP38432 576 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 CDR1P51861 262 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 LMNB2Q03252 620 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 SCAPQ12770 1279 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 DUSP4Q13115 394 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 PLD1Q13393 1074 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 CUL1Q13616 776 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 DPYSL3Q14195 570 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 DDR2Q16832 855 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 EFHC2Q5JST6 749 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 RASIP1Q5U651 963 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 SYPL2Q5VXT5 272 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 MSANTD2Q6P1R3 559 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 CCDC137Q6PK04 289 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 ADAT2Q7Z6V5 191 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 PDZD8Q8NEN9 1154 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 DQX1Q8TE96 717 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 RNF139Q8WU17 664 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 OVCA2Q8WZ82 227 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 FBXO32Q969P5 355 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 ACSF2Q96CM8 615 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 FAF2Q96CS3 445 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 SERPINB11Q96P15 392 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 CDK5RAP1Q96SZ6 601 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 PNKPQ96T60 521 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 CLSTN3Q9BQT9 956 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 TTLL2Q9BWV7 592 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 HEMGNQ9BXL5 484 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 RXFP1Q9HBX9 757 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 PCDH18Q9HCL0 1135 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 TLR8Q9NR97 1041 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 OLA1Q9NTK5 396 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 DDIT4Q9NX09 232 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 CLIC5Q9NZA1 410 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 AMACRQ9UHK6 382 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 UTP11Q9Y3A2 253 aaKnown RBP12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 NR2E1Q9Y466 385 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 GREB1Q4ZG55 1949 aa12.43□□□□□ -0.42
POLR2J3-210ENST00000504677 TCRBV7S2A1N4TA0A589 114 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 APOC4-APOC2K7ER74 178 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 ADAM12O43184 909 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 GAS8O95995 478 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 IGLV3-25P01717 112 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 APOC2P02655 101 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 LINC00271P0C7V0 271 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 TGM2P21980 687 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 ARL4AP40617 200 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 GPR15P49685 360 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 VSNL1P62760 191 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 UBE3AQ05086 875 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 IFRD2Q12894 506 aaPredicted RBP12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 NME3Q13232 169 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 MTA1Q13330 715 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 NNTQ13423 1086 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 VEPH1Q14D04 833 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 BRMS1LQ5PSV4 323 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 KAZNQ674X7 775 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 TADA2BQ86TJ2 420 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 TAC4Q86UU9 113 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 FAM131BQ86XD5 332 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 RFX6Q8HWS3 928 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 CCDC105Q8IYK2 499 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 ZDHHC14Q8IZN3 488 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 DHX35Q9H5Z1 703 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 GDF3Q9NR23 364 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 PIGVQ9NUD9 493 aa12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 DMGDHQ9UI17 866 aaKnown RBP12.42□□□□□ -0.42
POLR2J3-210ENST00000504677 FZD10Q9ULW2 581 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms