RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 FXR1P51114 621 aaKnown RBP eCLIP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TLE1Q04724 770 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NEXNQ0ZGT2 675 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FOXI1Q12951 378 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TAF5Q15542 800 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MEA1Q16626 185 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GEN1Q17RS7 908 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FLYWCH1Q4VC44 716 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PABPC1LQ4VXU2 614 aaKnown RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 HECTD3Q5T447 861 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ABHD17BQ5VST6 288 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FOXR2Q6PJQ5 311 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GADL1Q6ZQY3 521 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LRRTM4Q86VH4 590 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CCDC33Q8N5R6 958 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ASB12Q8WXK4 309 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CAVIN3Q969G5 261 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ZG16BQ96DA0 208 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TBC1D31Q96DN5 1066 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 APIPQ96GX9 242 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CLPTM1LQ96KA5 538 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 DMRTA2Q96SC8 542 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MPHOSPH8Q99549 860 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CGRRF1Q99675 332 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 BAG1Q99933 345 aaPredicted RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FAM167BQ9BTA0 163 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LRFN3Q9BTN0 628 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TLR10Q9BXR5 811 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ELAC1Q9H777 363 aaKnown RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 DBNDD1Q9H9R9 158 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PNPLA8Q9NP80 782 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 DACT1Q9NYF0 836 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GGA3Q9NZ52 723 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LRFN1Q9P244 771 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 AASSQ9UDR5 926 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CDYLQ9Y232 598 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 EPN1Q9Y6I3 576 aaPredicted RBP4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ABCC11Q96J66 1382 aa4.73□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ADGRL3Q9HAR2 1447 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NALCNQ8IZF0 1738 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GOLGA6L3A6NEY3 463 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TRIM64A6NGJ6 449 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TRIM64BA6NI03 449 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 P4HA2O15460 535 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 HOXC11O43248 304 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TOM1O60784 492 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SOAT2O75908 522 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 AGFG2O95081 481 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LMNAP02545 664 aaKnown RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ALDH2P05091 517 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ATP1A3P13637 1013 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 VEGFAP15692 232 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 BMP5P22003 454 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FDXRP22570 491 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TGM1P22735 817 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PLA2G5P39877 138 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LIFRP42702 1097 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 HSPA7P48741 367 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SEC24CP53992 1094 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 DRG2P55039 364 aaKnown RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TAP1Q03518 808 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FOXO1Q12778 655 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 RAB39AQ14964 217 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CYP2A13Q16696 494 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CCDC158Q5M9N0 1113 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FBXO47Q5MNV8 452 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SLC10A5Q5PT55 438 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 FAM205BPQ63HN1 556 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 UBE2Q1Q7Z7E8 422 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 HEATR4Q86WZ0 1026 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 TEX11Q8IYF3 940 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ARL6IP6Q8N6S5 226 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 NLGN4YQ8NFZ3 816 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 BOD1Q96IK1 185 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 COQ10AQ96MF6 247 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ASB2Q96Q27 587 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PNKPQ96T60 521 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 COLEC11Q9BWP8 271 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 PACSIN1Q9BY11 444 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 UNKQ9C0B0 810 aaKnown RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CXorf56Q9H5V9 222 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GALNT9Q9HCQ5 603 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 STK26Q9P289 416 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 ORC3Q9UBD5 711 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 GIMAP2Q9UG22 337 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 SLC45A2Q9UMX9 530 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 STXBP5LQ9Y2K9 1186 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 RRP7AQ9Y3A4 280 aaKnown RBP4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 MSH6P52701 1360 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 KIAA1210Q9ULL0 1709 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 DLC1Q96QB1 1528 aa4.72□□□□□ -1.65
PDLIM1P4-201ENST00000504327 LRRC14BA6NHZ5 514 aa4.71□□□□□ -1.66
PDLIM1P4-201ENST00000504327 APOL1O14791 398 aa4.71□□□□□ -1.66
PDLIM1P4-201ENST00000504327 AHCYL1O43865 530 aa4.71□□□□□ -1.66
PDLIM1P4-201ENST00000504327 IL18RAPO95256 599 aa4.71□□□□□ -1.66
PDLIM1P4-201ENST00000504327 DNTTP04053 509 aa4.71□□□□□ -1.66
PDLIM1P4-201ENST00000504327 SLC3A2P08195 630 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms