RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 MMP17Q9ULZ9 603 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 ZNF510Q9Y2H8 683 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 KIAA1549LQ6ZVL6 1849 aa12.58□□□□□ -0.4
MED28-203ENST00000503945 BICDL2A1A5D9 508 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 TRIM49BA6NDI0 452 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 TULP3O75386 442 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 KCNK5O95279 499 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 KLF8O95600 359 aaPredicted RBP12.57□□□□□ -0.4
MED28-203ENST00000503945 TBXAS1P24557 533 aaPredicted RBP12.57□□□□□ -0.4
MED28-203ENST00000503945 MPLP40238 635 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 CUL2Q13617 745 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 ELF2Q15723 593 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 SGO2Q562F6 1265 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 SDE2Q6IQ49 451 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 TPGS1Q6ZTW0 290 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 TRMT11Q7Z4G4 463 aaKnown RBP12.57□□□□□ -0.4
MED28-203ENST00000503945 C11orf74Q86VG3 221 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 ZC3H3Q8IXZ2 948 aaKnown RBP12.57□□□□□ -0.4
MED28-203ENST00000503945 ALLCQ8N6M5 410 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 TXNDC5Q8NBS9 432 aaKnown RBP12.57□□□□□ -0.4
MED28-203ENST00000503945 SLC35C1Q96A29 364 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 LSM14BQ9BX40 385 aaKnown RBP12.57□□□□□ -0.4
MED28-203ENST00000503945 BBS2Q9BXC9 721 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 NMUR1Q9HB89 426 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
MED28-203ENST00000503945 OSER1Q9NX31 292 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 HESX1Q9UBX0 185 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 MAN1B1Q9UKM7 699 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 PCDHGA5Q9Y5G8 931 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 MYOFQ9NZM1 2061 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 USP24Q9UPU5 2620 aa12.57□□□□□ -0.4
MED28-203ENST00000503945 HOXC11O43248 304 aaPredicted RBP12.56□□□□□ -0.4
MED28-203ENST00000503945 MAP3K13O43283 966 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 GNA14O95837 355 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 VDRP11473 427 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 CD19P15391 556 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 GBP1P32455 592 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 CHKAP35790 457 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 FMO5P49326 533 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 LRMPQ12912 555 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 BYSLQ13895 437 aaKnown RBP12.56□□□□□ -0.4
MED28-203ENST00000503945 TCEAL6Q6IPX3 200 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 ANO7Q6IWH7 933 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 KLHL10Q6JEL2 608 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 RSRC2Q7L4I2 434 aaKnown RBP12.56□□□□□ -0.4
MED28-203ENST00000503945 SCD5Q86SK9 330 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 PIGZQ86VD9 579 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 C12orf40Q86WS4 652 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 PGBD3Q8N328 593 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 IL17RCQ8NAC3 791 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 NELFBQ8WX92 580 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 TCEAL3Q969E4 200 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 WBP2Q969T9 261 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 ARID3AQ99856 593 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 LRRC4Q9HBW1 653 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 VPS45Q9NRW7 570 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 INVSQ9Y283 1065 aa12.56□□□□□ -0.4
MED28-203ENST00000503945 PTPRDP23468 1912 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 LAMA1P25391 3075 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 ANTXRLA6NF34 631 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 NEDD8-MDP1E9PL57 170 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 MDM4O15151 490 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 PMM2O15305 246 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 GREM1O60565 184 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 FGFR1OPO95684 399 aaKnown RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 ZBED1O96006 694 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 TYRP14679 529 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 CD44P16070 742 aaKnown RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 KIR2DL1P43626 348 aaPredicted RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 TKTL1P51854 596 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 SHC2P98077 582 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 KDSRQ06136 332 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 EFEMP1Q12805 493 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 RAB41Q5JT25 222 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 C10orf76Q5T2E6 689 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 RNF43Q68DV7 783 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 GRAMD4Q6IC98 578 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 RASSF3Q86WH2 238 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 ETFBKMTQ8IXQ9 262 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 CNOT6LQ96LI5 555 aaKnown RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 NT5C1BQ96P26 610 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 IPO9Q96P70 1041 aaKnown RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 DCLK3Q9C098 648 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 DNAJC17Q9NVM6 304 aaKnown RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
MED28-203ENST00000503945 STRIP2Q9ULQ0 834 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
MED28-203ENST00000503945 STARD13Q9Y3M8 1113 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 PCDHB4Q9Y5E5 795 aa12.55□□□□□ -0.4
MED28-203ENST00000503945 BCLAF3A2AJT9 711 aaKnown RBP12.54□□□□□ -0.4
MED28-203ENST00000503945 SGK1O00141 431 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 BIN1O00499 593 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 XPO1O14980 1071 aaKnown RBP12.54□□□□□ -0.4
MED28-203ENST00000503945 P4HA2O15460 535 aa12.54□□□□□ -0.4
MED28-203ENST00000503945 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms