RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 USP29Q9HBJ7 922 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 CNGB3Q9NQW8 809 aa22.21■■□□□ 1.15
UBE2D3-216ENST00000503742 ARVCFO00192 962 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 AGTP01019 485 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 FYNP06241 537 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 RABGGTBP53611 331 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 PITX1P78337 314 aaPredicted RBP22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 GUCY1A3Q02108 690 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 MYLPFQ96A32 169 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 RTP4Q96DX8 246 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 SUSD3Q96L08 255 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 C9orf72Q96LT7 481 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 SERPINB12Q96P63 405 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 PHACTR1Q9C0D0 580 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 POPDC2Q9HBU9 364 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 SAYSD1Q9NPB0 183 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 FZD10Q9ULW2 581 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 PHF24Q9UPV7 400 aa22.2■■□□□ 1.14
UBE2D3-216ENST00000503742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 SMIM23A6NLE4 172 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 ITGB1P05556 798 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 ABHD2P08910 425 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 GRK4P32298 578 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 SKIDA1Q1XH10 827 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 SYPL2Q5VXT5 272 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 HASPINQ8TF76 798 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 STAP1Q9ULZ2 295 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 USP3Q9Y6I4 520 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 H7C0C1 242 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 ALOX15BO15296 676 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 FKTNO75072 461 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 SLCO1A2P46721 670 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 ATP5OP48047 213 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 VEGFBP49765 207 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 PRMT2P55345 433 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 LONRF1Q17RB8 773 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 ANKRD22Q5VYY1 191 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 FAM131BQ86XD5 332 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 CSPG4P5Q96PW8 444 aa22.19■■□□□ 1.14
UBE2D3-216ENST00000503742 BCLAF3A2AJT9 711 aaKnown RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 YJEFN3A6XGL0 299 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 E7ENQ6 273 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 SMAPO00193 183 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 ZFXP17010 805 aaPredicted RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 TYMPP19971 482 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 IFI35P80217 286 aaPredicted RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 DSC1Q08554 894 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 ZSCAN26Q16670 478 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 CLLU1OSQ5K130 101 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 GLB1LQ6UWU2 654 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 B4GALNT4Q76KP1 1039 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 TTC25Q96NG3 672 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 CWC15Q9P013 229 aaKnown RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 HEY1Q9Y5J3 304 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 CFAP69A5D8W1 941 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 B4GALT3O60512 393 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 RDXP35241 583 aaKnown RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 NRLP54845 237 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 BHLHA9Q7RTU4 235 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 OR10T2Q8NGX3 314 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 ZNF296Q8WUU4 475 aaPredicted RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 RHOBTB2Q9BYZ6 727 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 STMN4Q9H169 189 aaPredicted RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 TMLHEQ9NVH6 421 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 RCOR3Q9P2K3 495 aaPredicted RBP22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 NAALADL1Q9UQQ1 740 aa22.18■■□□□ 1.14
UBE2D3-216ENST00000503742 PTPRDP23468 1912 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 ARHGEF37A1IGU5 675 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 F8W810 466 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 M0QYT0 321 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 YY1P25490 414 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 LSP1P33241 339 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 FASTKD3Q14CZ7 662 aaKnown RBP22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 ARHGEF6Q15052 776 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 OVOS1Q6IE37 1185 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 CENPUQ71F23 418 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 ZNF280BQ86YH2 543 aa22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 COL4A4P53420 1690 aaPredicted RBP22.17■■□□□ 1.14
UBE2D3-216ENST00000503742 NLRC5Q86WI3 1866 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 DDHD2O94830 711 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 MMP13P45452 471 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 NR2C2P49116 596 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 CDK7P50613 346 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 SLC10A2Q12908 348 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 XRCC4Q13426 336 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 STAT4Q14765 748 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 HIF1AQ16665 826 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 LRRTM3Q86VH5 581 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 PYROXD2Q8N2H3 581 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 CNOT10Q9H9A5 744 aaKnown RBP22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 PRDM16Q9HAZ2 1276 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 TCRBV7S3A2A0A539 114 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 E7ESA3 106 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 TMEM63AO94886 807 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 ZBED1O96006 694 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 USP17L7P0C7H9 530 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 RBL1P28749 1068 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 GBE1Q04446 702 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 GAD2Q05329 585 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 NOMO2Q5JPE7 1267 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms