RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TTC8Q8TAM2 541 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 SYN2Q92777 582 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-205ENST00000503401 MARCH2Q9P0N8 246 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 WNT6Q9Y6F9 365 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 GOLGA8SH3BPF8 625 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 DDX3XO00571 662 aaKnown RBP eCLIP17.25■□□□□ 0.352e-13■■□□□ 13
SCLT1-205ENST00000503401 MSI1O43347 362 aaKnown RBP17.25■□□□□ 0.35
SCLT1-205ENST00000503401 TPM1P09493 284 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 MMP8P22894 467 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 GABRB2P47870 512 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 SNX16P57768 344 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 SLC6A3Q01959 620 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 TBX2Q13207 712 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-205ENST00000503401 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
SCLT1-205ENST00000503401 UBALD2Q8IYN6 164 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 ZNF276Q8N554 614 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 ADAM32Q8TC27 787 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 MRFAP1L1Q96HT8 127 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 CDK5RAP1Q96SZ6 601 aaKnown RBP17.25■□□□□ 0.35
SCLT1-205ENST00000503401 LINC00597Q9H2U6 94 aa17.25■□□□□ 0.35
SCLT1-205ENST00000503401 SLC12A8A0AV02 714 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 PI4K2BG5E9Z4 385 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 ARNTLO00327 626 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 DLL1O00548 723 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 CHADO15335 359 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 MFAP3LO75121 409 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 SERPING1P05155 500 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 ALADP13716 330 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 ARSAP15289 507 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 RNASE9P60153 205 aaKnown RBP17.24■□□□□ 0.35
SCLT1-205ENST00000503401 YWHAZP63104 245 aaKnown RBP17.24■□□□□ 0.35
SCLT1-205ENST00000503401 FAM102AQ5T9C2 384 aaPredicted RBP17.24■□□□□ 0.35
SCLT1-205ENST00000503401 TOGARAM2Q6ZUX3 1019 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 MSANTD4Q8NCY6 345 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 EDAQ92838 391 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 DNAJC7Q99615 494 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 EBF3Q9H4W6 596 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 POPDC2Q9HBU9 364 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 SLC2A4RGQ9NR83 387 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 THG1LQ9NWX6 298 aaKnown RBP17.24■□□□□ 0.35
SCLT1-205ENST00000503401 GTSE1Q9NYZ3 720 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 ADAM22Q9P0K1 906 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 ARHGAP20Q9P2F6 1191 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 CA14Q9ULX7 337 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 SH3BP1Q9Y3L3 701 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 COL4A2P08572 1712 aa17.24■□□□□ 0.35
SCLT1-205ENST00000503401 CAPN9O14815 690 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 TCF3P15923 654 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
SCLT1-205ENST00000503401 PTP4A2Q12974 167 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 ARHGAP29Q52LW3 1261 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 DCAF6Q58WW2 860 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 EFHC1Q5JVL4 640 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 WDR59Q6PJI9 974 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 PHF13Q86YI8 300 aaPredicted RBP17.23■□□□□ 0.35
SCLT1-205ENST00000503401 DEFB106AQ8N104 65 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 OR8K1Q8NGG5 319 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 DQX1Q8TE96 717 aaKnown RBP17.23■□□□□ 0.35
SCLT1-205ENST00000503401 IRF7Q92985 503 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 FAM83CQ9BQN1 747 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCLT1-205ENST00000503401 HEBP1Q9NRV9 189 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 OLA1Q9NTK5 396 aaKnown RBP17.23■□□□□ 0.35
SCLT1-205ENST00000503401 ABHD10Q9NUJ1 306 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 DUS2Q9NX74 493 aaKnown RBP17.23■□□□□ 0.35
SCLT1-205ENST00000503401 FBXL21Q9UKT6 434 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 STRIP2Q9ULQ0 834 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 F5P12259 2224 aa17.23■□□□□ 0.35
SCLT1-205ENST00000503401 OTOL1A6NHN0 477 aaPredicted RBP17.22■□□□□ 0.35
SCLT1-205ENST00000503401 HSF2BPO75031 334 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 STC2O76061 302 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 GJB6O95452 261 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 ADCY5O95622 1261 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 ACAD10Q6JQN1 1059 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 MSANTD2Q6P1R3 559 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 MON1BQ7L1V2 547 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 SLC26A9Q7LBE3 791 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 DDX42Q86XP3 938 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCLT1-205ENST00000503401 ZDHHC17Q8IUH5 632 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 BBS7Q8IWZ6 715 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 OSCP1Q8WVF1 389 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 HPS4Q9NQG7 708 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 ADAMTS1Q9UHI8 967 aa17.22■□□□□ 0.35
SCLT1-205ENST00000503401 AKR1B15C9JRZ8 316 aaPredicted RBP17.21■□□□□ 0.35
SCLT1-205ENST00000503401 GREM1O60565 184 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
SCLT1-205ENST00000503401 IFNAR2P48551 515 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 SIGLEC14Q08ET2 396 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 SIX5Q8N196 739 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 SLC2A13Q96QE2 648 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 METTL5Q9NRN9 209 aaKnown RBP17.21■□□□□ 0.35
SCLT1-205ENST00000503401 ASNSD1Q9NWL6 643 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 BZW2Q9Y6E2 419 aaKnown RBP17.21■□□□□ 0.35
SCLT1-205ENST00000503401 SYNJ2BP-COX16A0A087WUM0 186 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 E2F8A0AVK6 867 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 KRBA1A5PL33 1030 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 KLKB1P03952 638 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 GLI1P08151 1106 aa17.21■□□□□ 0.35
SCLT1-205ENST00000503401 EIF4A3P38919 411 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms