RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 IZUMO3Q5VZ72 239 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 HFE2Q6ZVN8 426 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 CRIPAKQ8N1N5 446 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 SCLYQ96I15 445 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 FOXP3Q9BZS1 431 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 CALCOCO1Q9P1Z2 691 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 FZD10Q9ULW2 581 aa22.9■■□□□ 1.26
PTPN13-205ENST00000502971 M0QYT0 321 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 DNALI1O14645 258 aaPredicted RBP22.89■■□□□ 1.26
PTPN13-205ENST00000502971 LTFP02788 710 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 ALDH2P05091 517 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 FYNP06241 537 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 ZFXP17010 805 aaPredicted RBP22.89■■□□□ 1.26
PTPN13-205ENST00000502971 P3H1Q32P28 736 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 SYPL2Q5VXT5 272 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 HIBCHQ6NVY1 386 aaPredicted RBP22.89■■□□□ 1.26
PTPN13-205ENST00000502971 CEP128Q6ZU80 1094 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 CCDC185Q8N715 623 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 PQLC3Q8N755 202 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 PLD5Q8N7P1 536 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 PCDH19Q8TAB3 1148 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 RSAD2Q8WXG1 361 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 SLC9A7Q96T83 725 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 TMEM175Q9BSA9 504 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 PRDM16Q9HAZ2 1276 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 RCOR3Q9P2K3 495 aaPredicted RBP22.89■■□□□ 1.26
PTPN13-205ENST00000502971 ADAM28Q9UKQ2 775 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 NAALADL1Q9UQQ1 740 aa22.89■■□□□ 1.26
PTPN13-205ENST00000502971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 AIF1P55008 147 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 CCL23P55773 120 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 EIF3BP55884 814 aaKnown RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 TLE2Q04725 743 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 DEUP1Q05D60 604 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 TRIM60Q495X7 471 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 PPP6R3Q5H9R7 873 aaPredicted RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 BHLHA9Q7RTU4 235 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 GLIS1Q8NBF1 620 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 PGAP3Q96FM1 320 aaPredicted RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 TRIM62Q9BVG3 475 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 MTMR10Q9NXD2 777 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 USP3Q9Y6I4 520 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 NUDT17P0C025 328 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 RBP3P10745 1247 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 CYP2F1P24903 491 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 STIP1P31948 543 aaKnown RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 BCAR1P56945 870 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 GPS1Q13098 491 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 CEP85LQ5SZL2 805 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 TRMT10CQ7L0Y3 403 aaKnown RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 PRUNE1Q86TP1 453 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 FAM131BQ86XD5 332 aa22.88■■□□□ 1.25
PTPN13-205ENST00000502971 KCTD15Q96SI1 283 aaPredicted RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 TPX2Q9ULW0 747 aaKnown RBP22.88■■□□□ 1.25
PTPN13-205ENST00000502971 GOLGA6L10A6NI86 522 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 ZSCAN5DPP0CG00 497 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 ROR1Q01973 937 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 NFE2Q16621 373 aaPredicted RBP22.87■■□□□ 1.25
PTPN13-205ENST00000502971 VARS2Q5ST30 1063 aaKnown RBP22.87■■□□□ 1.25
PTPN13-205ENST00000502971 DENND2CQ68D51 928 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 NPNTQ6UXI9 565 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 BEND5Q7L4P6 421 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 PCGF5Q86SE9 256 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 FUBP3Q96I24 572 aaKnown RBP eCLIP22.87■■□□□ 1.25
PTPN13-205ENST00000502971 PPP1R12CQ9BZL4 782 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 ADAM7Q9H2U9 754 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 EPB41L4BQ9H329 900 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 AAASQ9NRG9 546 aa22.87■■□□□ 1.25
PTPN13-205ENST00000502971 TTC3P53804 2025 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 NLRC5Q86WI3 1866 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 F9P00740 461 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 IFNB1P01574 187 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 NCAM1P13591 858 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 ETS1P14921 441 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 GATMP50440 423 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 PITX1P78337 314 aaPredicted RBP22.86■■□□□ 1.25
PTPN13-205ENST00000502971 MRPL58Q14197 206 aaKnown RBP22.86■■□□□ 1.25
PTPN13-205ENST00000502971 SLC39A12Q504Y0 691 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 SLC7A14Q8TBB6 771 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 PTPRDP23468 1912 aa22.86■■□□□ 1.25
PTPN13-205ENST00000502971 GOLGA6CA6NDK9 693 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 GOLGA6DP0CG33 693 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 CYP2C18P33260 490 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 GRIK1P39086 918 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 ARL4AP40617 200 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 SLC11A1P49279 550 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 ZNF844Q08AG5 666 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 ELAVL2Q12926 359 aaKnown RBP22.85■■□□□ 1.25
PTPN13-205ENST00000502971 NME3Q13232 169 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 MORF4L2Q15014 288 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 DARS2Q6PI48 645 aaKnown RBP22.85■■□□□ 1.25
PTPN13-205ENST00000502971 C1orf228Q6PIY5 440 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 UBE2Q1Q7Z7E8 422 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 NTAN1Q96AB6 310 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 ARL8AQ96BM9 186 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 CSPG4P5Q96PW8 444 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 SEMA4AQ9H3S1 761 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 PIGVQ9NUD9 493 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 MARCH5Q9NX47 278 aa22.85■■□□□ 1.25
PTPN13-205ENST00000502971 GOLGA6AQ9NYA3 693 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms