RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CLNKQ7Z7G1 428 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF398Q8TD17 642 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 PPP1R13LQ8WUF5 828 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 TBC1D10AQ9BXI6 508 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 UGT1A7Q9HAW7 530 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 UGT1A10Q9HAW8 530 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 UGT1A8Q9HAW9 530 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 RNF181Q9P0P0 153 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 CNTN3Q9P232 1028 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 C15orf41Q9Y2V0 281 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 A0A0G2JND7 137 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 SLC15A5A6NIM6 579 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 SNAI1O95863 264 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-204ENST00000501271 CCDC130P13994 396 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 PRKCHP24723 683 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 EPHB2P29323 1055 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 L1CAMP32004 1257 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 PRKD1Q15139 912 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-204ENST00000501271 ZBTB6Q15916 424 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 SOWAHAQ2M3V2 549 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 SPDYAQ5MJ70 313 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 TTC39BQ5VTQ0 682 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 GPRC5AQ8NFJ5 357 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 OR6B3Q8NGW1 331 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 GIMAP7Q8NHV1 300 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 NSMCE1Q8WV22 266 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 SRPK1Q96SB4 655 aaKnown RBP10.23□□□□□ -0.77
CLIP1-204ENST00000501271 TACO1Q9BSH4 297 aaKnown RBP10.23□□□□□ -0.77
CLIP1-204ENST00000501271 C11orf84Q9BUA3 381 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-204ENST00000501271 DHX35Q9H5Z1 703 aaKnown RBP10.23□□□□□ -0.77
CLIP1-204ENST00000501271 KCNK13Q9HB14 408 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 HESX1Q9UBX0 185 aa10.23□□□□□ -0.77
CLIP1-204ENST00000501271 WFS1O76024 890 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 MMP3P08254 477 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 RPSAP08865 295 aaKnown RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 CSH1P0DML2 217 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 CSH2P0DML3 217 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 SMPD1P17405 629 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 ADORA2BP29275 332 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 MAGEA3P43357 314 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 SERPINB4P48594 390 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 BMPR2Q13873 1038 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 DPYSL2Q16555 572 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 UNC5AQ6ZN44 842 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 MPP5Q8N3R9 675 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 CCDC185Q8N715 623 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 C7orf31Q8N865 590 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 FAM13CQ8NE31 585 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 N4BP2L2Q92802 583 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 PRR11Q96HE9 360 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 TRIM55Q9BYV6 548 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 FRMD8Q9BZ67 464 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 FAM49AQ9H0Q0 323 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 ADAMTS10Q9H324 1103 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 NXF3Q9H4D5 531 aaKnown RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 PLEKHA5Q9HAU0 1116 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 SETD4Q9NVD3 440 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 MTMR10Q9NXD2 777 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 NOP53Q9NZM5 478 aaKnown RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 MFHAS1Q9Y4C4 1052 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 NR2E3Q9Y5X4 410 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 C2orf71A6NGG8 1288 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 A8MXQ7 604 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 COPEO14579 308 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 ADCY6O43306 1168 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 APOEP02649 317 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 LCP1P13796 627 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 GM2AP17900 193 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 ELF1P32519 619 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 PTPN9P43378 593 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 MRPS5P82675 430 aaKnown RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 SNAPC2Q13487 334 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 ARHGAP17Q68EM7 881 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 SLC27A1Q6PCB7 646 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 TRMT10BQ6PF06 316 aaKnown RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 LONP2Q86WA8 852 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 CDKL3Q8IVW4 592 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 GPATCH11Q8N954 259 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 STK32AQ8WU08 396 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 KBTBD7Q8WVZ9 684 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 KCTD15Q96SI1 283 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-204ENST00000501271 HEY2Q9UBP5 337 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF180Q9UJW8 692 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 AP4E1Q9UPM8 1137 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 DERAQ9Y315 318 aa10.22□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF487B1APH4 448 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 TRAFD1O14545 582 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-204ENST00000501271 DIAPH2O60879 1101 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 RFPL1O75677 317 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 RECQL4O94761 1208 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 PDGFRBP09619 1106 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 DLDP09622 509 aaKnown RBP10.21□□□□□ -0.77
CLIP1-204ENST00000501271 LMO2P25791 158 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 GRIA1P42261 906 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 ZNF618Q5T7W0 954 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 C9orf57Q5W0N0 161 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 KCNT2Q6UVM3 1135 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms