RNA–Protein interactions for RNA: ENST00000501038.6

PLXND1-202, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-202ENST00000501038 COL6A1P12109 1028 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 STIP1P31948 543 aaKnown RBP19.31■□□□□ 0.68
PLXND1-202ENST00000501038 PITX1P78337 314 aaPredicted RBP19.31■□□□□ 0.68
PLXND1-202ENST00000501038 MAPRE1Q15691 268 aaKnown RBP19.31■□□□□ 0.68
PLXND1-202ENST00000501038 C6orf118Q5T5N4 469 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 ZNF280BQ86YH2 543 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 FAM126BQ8IXS8 530 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 PPIL6Q8IXY8 311 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 ARFGAP2Q8N6H7 521 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 OR10T2Q8NGX3 314 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 PRCCQ92733 491 aaPredicted RBP19.31■□□□□ 0.68
PLXND1-202ENST00000501038 PGM2Q96G03 612 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 RHOBTB2Q9BYZ6 727 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 UNC93B1Q9H1C4 597 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 TMLHEQ9NVH6 421 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 KANSL3Q9P2N6 904 aa19.31■□□□□ 0.68
PLXND1-202ENST00000501038 FARP1Q9Y4F1 1045 aaPredicted RBP19.31■□□□□ 0.68
PLXND1-202ENST00000501038 CFAP69A5D8W1 941 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 A6NNZ2 444 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 F8W810 466 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 TMEM189-UBE2V1I3L0A0 370 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 M0QYT0 321 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 MAGEA4P43358 317 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 CTCFP49711 727 aaPredicted RBP19.3■□□□□ 0.68
PLXND1-202ENST00000501038 ATP1A2P50993 1020 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 TSPY1Q01534 308 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 DEUP1Q05D60 604 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 KYNUQ16719 465 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 TUBB8Q3ZCM7 444 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 SYPL2Q5VXT5 272 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 ZC3H18Q86VM9 953 aaKnown RBP19.3■□□□□ 0.68
PLXND1-202ENST00000501038 FAM131BQ86XD5 332 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 COLGALT2Q8IYK4 626 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 FAM71DQ8N9W8 422 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 TMEM209Q96SK2 561 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 RBM15Q96T37 977 aaKnown RBP eCLIP19.3■□□□□ 0.686e-7■■■■□ 23.8
PLXND1-202ENST00000501038 TMEM161AQ9NX61 479 aa19.3■□□□□ 0.68
PLXND1-202ENST00000501038 RCOR3Q9P2K3 495 aaPredicted RBP19.3■□□□□ 0.68
PLXND1-202ENST00000501038 COL4A4P53420 1690 aaPredicted RBP19.3■□□□□ 0.68
PLXND1-202ENST00000501038 TLDC2A0PJX2 215 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 YJEFN3A6XGL0 299 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 E7ENQ6 273 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 RASGRF2O14827 1237 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 ZBED1O96006 694 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 LTFP02788 710 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 FYNP06241 537 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 USP17L7P0C7H9 530 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 BDNFP23560 247 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 LRRTM3Q86VH5 581 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 SCML4Q8N228 414 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 EPS8L3Q8TE67 593 aaKnown RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 IRGQQ8WZA9 623 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 CPT1BQ92523 772 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 CSPG4P5Q96PW8 444 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 MAGEB5Q9BZ81 275 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 ELAC1Q9H777 363 aaKnown RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 PRDM16Q9HAZ2 1276 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 SAYSD1Q9NPB0 183 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 DMAP1Q9NPF5 467 aaPredicted RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 TBC1D13Q9NVG8 400 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 NAALADL1Q9UQQ1 740 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 HEY1Q9Y5J3 304 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 ZNF638Q14966 1978 aaKnown RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 BCLAF3A2AJT9 711 aaKnown RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 SMIM23A6NLE4 172 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 SMAPO00193 183 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 CAPN9O14815 690 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 RGS16O15492 202 aaPredicted RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 NBNO60934 754 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 HPDP32754 393 aaPredicted RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 ARL4AP40617 200 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 MAGOHP61326 146 aaKnown RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 GNGT1P63211 74 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 HTRA3P83110 453 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 SKIDA1Q1XH10 827 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 BHLHA9Q7RTU4 235 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 FAM193BQ96PV7 902 aaPredicted RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 USP29Q9HBJ7 922 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 CWC15Q9P013 229 aaKnown RBP19.29■□□□□ 0.68
PLXND1-202ENST00000501038 USP3Q9Y6I4 520 aa19.29■□□□□ 0.68
PLXND1-202ENST00000501038 SYNJ2BP-COX16A0A087WUM0 186 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 H3BRJ5 948 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 ABHD2P08910 425 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 PPP2R2AP63151 447 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 YWHAHQ04917 246 aaPredicted RBP19.28■□□□□ 0.68
PLXND1-202ENST00000501038 RNASELQ05823 741 aaKnown RBP19.28■□□□□ 0.68
PLXND1-202ENST00000501038 CENPUQ71F23 418 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 B4GALNT4Q76KP1 1039 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 CDKL3Q8IVW4 592 aaPredicted RBP19.28■□□□□ 0.68
PLXND1-202ENST00000501038 PYROXD2Q8N2H3 581 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 NAT8LQ8N9F0 302 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 SLC7A14Q8TBB6 771 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 RTP4Q96DX8 246 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 C9orf72Q96LT7 481 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 TTC25Q96NG3 672 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 SLC9A7Q96T83 725 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 PHACTR1Q9C0D0 580 aa19.28■□□□□ 0.68
PLXND1-202ENST00000501038 STMN4Q9H169 189 aaPredicted RBP19.28■□□□□ 0.68
PLXND1-202ENST00000501038 PNPLA8Q9NP80 782 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms