RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 RECQL5O94762 991 aaPredicted RBP11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 APOL3O95236 402 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 MYBL2P10244 700 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 UGT1A5P35504 534 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 RGS8P57771 180 aaPredicted RBP11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 XIAPP98170 497 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 TMEM51Q9NW97 253 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 SNAP23O00161 211 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 HLA-DQA2P01906 255 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 SCP2P22307 547 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 PCSK1P29120 753 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 HPCAL1P37235 193 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 CACNA2D1P54289 1103 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 TTLL4Q14679 1199 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 LRRC74BQ6ZQY2 392 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 ZSWIM6Q9HCJ5 1215 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 FLT1P17948 1338 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 RBP1P09455 135 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 STOMP27105 288 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 VAMP7P51809 220 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 LRRC70Q7Z2Q7 622 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 EMC1Q8N766 993 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 ZNF594Q96JF6 807 aaPredicted RBP11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 TLR7Q9NYK1 1049 aaKnown RBP11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 ERGIC3Q9Y282 383 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 SIN3BO75182 1162 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 CHN1P15882 459 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 MECP2P51608 486 aaKnown RBP11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 CACNB3P54284 484 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 PRKAA2P54646 552 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 ARHGAP15Q53QZ3 475 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 IL31Q6EBC2 164 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 KCTD14Q9BQ13 255 aaPredicted RBP11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 NECTIN3Q9NQS3 549 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 AKAP8O43823 692 aaKnown RBP11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 SRGAP2O75044 1071 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 KRT33AO76009 404 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 A1BGP04217 495 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 GRIK3Q13003 919 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 NEK7Q8TDX7 302 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 ST3GAL5Q9UNP4 418 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 GRIP1Q9Y3R0 1128 aa11.5□□□□□ -0.57
AC055713.1-201ENST00000498967 RGSL1A5PLK6 1076 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 FDFT1P37268 417 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 PABPC5Q96DU9 382 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 FAM120BQ96EK7 910 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 LRRC4BQ9NT99 713 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 UPB1Q9UBR1 384 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 NUDT14O95848 222 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 MTSS1LQ765P7 747 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 R3HCC1LQ7Z5L2 792 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 DNAJC10Q8IXB1 793 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 DEPDC4Q8N2C3 294 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 SPATA18Q8TC71 538 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 ELOVL6Q9H5J4 265 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 BRWD1Q9NSI6 2320 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 CHURC1-FNTBB4DL54 471 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 MDH1BQ5I0G3 518 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 ZNF280BQ86YH2 543 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 TMEM132CQ8N3T6 1108 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 REXO5Q96IC2 774 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 ZCCHC2Q9C0B9 1178 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 FAM49AQ9H0Q0 323 aaPredicted RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 CCDC86Q9H6F5 360 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 PNMA6FA0A0J9YX94 578 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 LIN7AO14910 233 aaPredicted RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 TPST1O60507 370 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 PRLP01236 227 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 PCCAP05165 728 aaPredicted RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 OGNP20774 298 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 UBE3CQ15386 1083 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 RBM20Q5T481 1227 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 SRFBP1Q8NEF9 429 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 NSMCE2Q96MF7 247 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 NUP50Q9UKX7 468 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 CHKBQ9Y259 395 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 NEO1Q92859 1461 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 SLC33A1O00400 549 aaPredicted RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 GAS2O43903 313 aaKnown RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 LDLRP01130 860 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 MYDGFQ969H8 173 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 TEKT5Q96M29 485 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 TBATAQ96M53 351 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 BPIFA3Q9BQP9 254 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 CLPBQ9H078 707 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 SMURF2Q9HAU4 748 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 CAPN10Q9HC96 672 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 UBN2Q6ZU65 1347 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 PDHA2P29803 388 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 HPS6Q86YV9 775 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 RHOBTB2Q9BYZ6 727 aa11.49□□□□□ -0.57
AC055713.1-201ENST00000498967 NOD2Q9HC29 1040 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms