RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 LIN7CQ9NUP9 197 aaKnown RBP4.13□□□□□ -1.75
CALD1-224ENST00000498254 TRPC5Q9UL62 973 aaPredicted RBP4.13□□□□□ -1.75
CALD1-224ENST00000498254 HSF4Q9ULV5 492 aa4.13□□□□□ -1.75
CALD1-224ENST00000498254 LAS1LQ9Y4W2 734 aaKnown RBP4.13□□□□□ -1.75
CALD1-224ENST00000498254 AFG3L2Q9Y4W6 797 aa4.13□□□□□ -1.75
CALD1-224ENST00000498254 PCDHB2Q9Y5E7 798 aa4.13□□□□□ -1.75
CALD1-224ENST00000498254 XDHP47989 1333 aa4.13□□□□□ -1.75
CALD1-224ENST00000498254 A0A1W2PPH5 198 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 A6NCN8 305 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 FAM90A20PA6NIJ5 464 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 SLC38A8A6NNN8 435 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 DIRC3C9JPN6 131 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 CA12O43570 354 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 CBFA2T3O75081 653 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 NDUFA10O95299 355 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 PLATP00750 562 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 CFIP05156 583 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 FESP07332 822 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 TMEM225BP0DP42 221 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 GGT5P36269 586 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 HNRNPMP52272 730 aaKnown RBP eCLIP4.12□□□□□ -1.75
CALD1-224ENST00000498254 CASP6P55212 293 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 EIF4A1P60842 406 aaKnown RBP4.12□□□□□ -1.75
CALD1-224ENST00000498254 ADAM17P78536 824 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 GALNT2Q10471 571 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 EFR3AQ14156 821 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 ANKRD1Q15327 319 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 TRIM60Q495X7 471 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 SPDYE7PQ495Y7 208 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 SLC45A4Q5BKX6 768 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 ZNF569Q5MCW4 686 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 UBXN11Q5T124 520 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 HAUS3Q68CZ6 603 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 NAIF1Q69YI7 327 aaPredicted RBP4.12□□□□□ -1.75
CALD1-224ENST00000498254 CFAP161Q6P656 301 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 Q6ZSN1 163 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 ANKS1BQ7Z6G8 1248 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 CAND1Q86VP6 1230 aaKnown RBP4.12□□□□□ -1.75
CALD1-224ENST00000498254 CHD1LQ86WJ1 897 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 FAM109AQ8N4B1 249 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 PDILTQ8N807 584 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 XAGE5Q8WWM1 108 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 LPIN2Q92539 896 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 SDCCAG3Q96C92 435 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 FAM89AQ96GI7 184 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 CHCHD6Q9BRQ6 235 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 CENPOQ9BU64 300 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 ABHD16BQ9H3Z7 469 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 JMJD4Q9H9V9 463 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 GLOD4Q9HC38 313 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 PREBQ9HCU5 417 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 AKIP1Q9NQ31 210 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 INTS13Q9NVM9 706 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 STEAP1Q9UHE8 339 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 VPS4AQ9UN37 437 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 RCE1Q9Y256 329 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 RABGAP1Q9Y3P9 1069 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 RPS6KL1Q9Y6S9 549 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 SPATA31A3Q5VYP0 1347 aa4.12□□□□□ -1.75
CALD1-224ENST00000498254 A1L4Q6 167 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 VWA3AA6NCI4 1184 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 OTOL1A6NHN0 477 aaPredicted RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 ZAR1LA6NP61 321 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 GRXCR1A8MXD5 290 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 PEX12O00623 359 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 TRIM24O15164 1050 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 SPTLC2O15270 562 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 CYP27B1O15528 508 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 PRICKLE3O43900 615 aaPredicted RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 GFPT2O94808 682 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 HEXIM1O94992 359 aaKnown RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 RTN3O95197 1032 aaPredicted RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 CNPP09543 421 aaKnown RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 ZEB1P37275 1124 aaPredicted RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 VAV2P52735 878 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 EIF5P55010 431 aaKnown RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 TIRAPP58753 221 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 PDE1CQ14123 709 aaPredicted RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 KCTD2Q14681 263 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 ACOX1Q15067 660 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 TSTQ16762 297 aaKnown RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 NBPF8Q3BBV2 869 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 CTXN3Q4LDR2 81 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 ITPRIPL1Q6GPH6 555 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 DGAT2L7PQ6IED9 249 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 GRHL2Q6ISB3 625 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 ACAD10Q6JQN1 1059 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 CCDC144NLQ6NUI1 221 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 MZT2BQ6NZ67 158 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 DSTYKQ6XUX3 929 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 C4orf50Q6ZRC1 276 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 BBS12Q6ZW61 710 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 HTR3DQ70Z44 454 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 MAVSQ7Z434 540 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 CCDC89Q8N998 374 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 FAM71DQ8N9W8 422 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 ANKRD52Q8NB46 1076 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 CPEB3Q8NE35 698 aaKnown RBP4.11□□□□□ -1.75
CALD1-224ENST00000498254 TOR1AIP2Q8NFQ8 470 aa4.11□□□□□ -1.75
CALD1-224ENST00000498254 MYCBPAPQ8TBZ2 947 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms