RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ZBED1O96006 694 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 KRT14P02533 472 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 APOC2P02655 101 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 USP17L7P0C7H9 530 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 PECAM1P16284 738 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 TGM2P21980 687 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NOS2P35228 1153 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 GJA8P48165 433 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NDUFV1P49821 464 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ARSEP51690 589 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC5A3P53794 718 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ATXN1P54253 815 aaKnown RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 YWHAZP63104 245 aaKnown RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ROR1Q01973 937 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 DEUP1Q05D60 604 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NOMO1Q15155 1222 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 TRIP13Q15645 432 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 OASLQ15646 514 aaKnown RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 DPYSL2Q16555 572 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NFE2Q16621 373 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC25A52Q3SY17 297 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 CTXN3Q4LDR2 81 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 BOLA3Q53S33 107 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ZC3H12AQ5D1E8 599 aaKnown RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 PPP6R3Q5H9R7 873 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 EFHC2Q5JST6 749 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM171A1Q5VUB5 890 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 DRICH1Q6PGQ1 229 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ZDHHC24Q6UX98 284 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 HFE2Q6ZVN8 426 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 TMC3Q7Z5M5 1100 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM131BQ86XD5 332 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 CEP57Q86XR8 500 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 CCDC185Q8N715 623 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 CCDC89Q8N998 374 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 CMASQ8NFW8 434 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ATL2Q8NHH9 583 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC7A14Q8TBB6 771 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ACTL9Q8TC94 416 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 FBXO25Q8TCJ0 367 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 CCHCR1Q8TD31 782 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 UBLCP1Q8WVY7 318 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 IRGQQ8WZA9 623 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NDRG1Q92597 394 aaKnown RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 CENPIQ92674 756 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NKD2Q969F2 451 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 FUBP3Q96I24 572 aaKnown RBP eCLIP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 KCTD15Q96SI1 283 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 KCNK16Q96T55 309 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 NPY6RQ99463 290 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 MAK16Q9BXY0 300 aaKnown RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ADAM33Q9BZ11 813 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 PCDH9Q9HC56 1237 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 MED4Q9NPJ6 270 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 RRN3Q9NYV6 651 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 WHRNQ9P202 907 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 FEZ2Q9UHY8 353 aaPredicted RBP8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 ZNF148Q9UQR1 794 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 FAN1Q9Y2M0 1017 aa8.41□□□□□ -1.06
PDZRN3-212ENST00000498048 YJEFN3A6XGL0 299 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 E7ENQ6 273 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 H3BQF6 201 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 M0QYT0 321 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 NDC80O14777 642 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 UPP2O95045 317 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 OAZ2O95190 189 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 ITGAVP06756 1048 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 NUDT7P0C024 238 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 NCAM1P13591 858 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 CYP2F1P24903 491 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 GRIK1P39086 918 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 PBX3P40426 434 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 ARL4AP40617 200 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 DRG2P55039 364 aaKnown RBP8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 PLTPP55058 493 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 EIF3EP60228 445 aaKnown RBP8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 PITX1P78337 314 aaPredicted RBP8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 NME3Q13232 169 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 IKBKEQ14164 716 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 PKN2Q16513 984 aaKnown RBP8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 CA9Q16790 459 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 LRRC26Q2I0M4 334 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 CFAP58Q5T655 872 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 ERMARDQ5T6L9 678 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 IZUMO3Q5VZ72 239 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 BHLHA9Q7RTU4 235 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 LRRTM3Q86VH5 581 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 SCN4BQ8IWT1 228 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 SCML4Q8N228 414 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 ALLCQ8N6M5 410 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 GOLGA6L1Q8N7Z2 621 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 BBOF1Q8ND07 529 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC35B2Q8TB61 432 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM71BQ8TC56 605 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 FAF2Q96CS3 445 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 ZIM3Q96PE6 472 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 UBXN6Q9BZV1 441 aa8.4□□□□□ -1.06
PDZRN3-212ENST00000498048 ZDHHC18Q9NUE0 388 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms