RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 MAP3K7CLP57077 242 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 RING1Q06587 406 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 ORC1Q13415 861 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 TPGS1Q6ZTW0 290 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 SLC2A14Q8TDB8 520 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 MRGPRX1Q96LB2 322 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 HSPA12BQ96MM6 686 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 SLC6A17Q9H1V8 727 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 CYLDQ9NQC7 956 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 RAD54BQ9Y620 910 aa22.98■■□□□ 1.27
CLIC4-204ENST00000497755 CUTAO60888 179 aa22.97■■□□□ 1.27
CLIC4-204ENST00000497755 CAPNS1P04632 268 aa22.97■■□□□ 1.27
CLIC4-204ENST00000497755 ATP5C1P36542 298 aaKnown RBP22.97■■□□□ 1.27
CLIC4-204ENST00000497755 NDST1P52848 882 aa22.97■■□□□ 1.27
CLIC4-204ENST00000497755 RAB44Q7Z6P3 723 aaPredicted RBP22.97■■□□□ 1.27
CLIC4-204ENST00000497755 C12orf29Q8N999 325 aa22.97■■□□□ 1.27
CLIC4-204ENST00000497755 CAMK1GQ96NX5 476 aa22.97■■□□□ 1.27
CLIC4-204ENST00000497755 HMGXB4Q9UGU5 601 aa22.97■■□□□ 1.27
CLIC4-204ENST00000497755 KNL1Q8NG31 2342 aa22.97■■□□□ 1.27
CLIC4-204ENST00000497755 WASH3PC4AMC7 463 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 POLR2DO15514 142 aaKnown RBP22.96■■□□□ 1.27
CLIC4-204ENST00000497755 SH3BP5O60239 455 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 GJB3O75712 270 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 SLC14A1Q13336 389 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 HNRNPDQ14103 355 aaKnown RBP22.96■■□□□ 1.27
CLIC4-204ENST00000497755 ZNF423Q2M1K9 1284 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 GPRIN1Q7Z2K8 1008 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 P2RY11Q96G91 374 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 FOXD4L1Q9NU39 408 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 DMAC2Q9NW81 257 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 CACNA2D2Q9NY47 1150 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 SCML2Q9UQR0 700 aa22.96■■□□□ 1.27
CLIC4-204ENST00000497755 PVALEFA0A1B0GWK0 134 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 HHLA1C9JL84 531 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 GFRA2O00451 464 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 CLSTN1O94985 981 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 DGKGP49619 791 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 DLG4P78352 724 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 SGSM1Q2NKQ1 1148 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 PLEKHG6Q3KR16 790 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 RGL4Q8IZJ4 473 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 FAM124BQ9H5Z6 455 aaPredicted RBP22.95■■□□□ 1.26
CLIC4-204ENST00000497755 MAGEF1Q9HAY2 307 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 NMUR1Q9HB89 426 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 FAM49BQ9NUQ9 324 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 FBXO10Q9UK96 956 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 LHX6Q9UPM6 363 aa22.95■■□□□ 1.26
CLIC4-204ENST00000497755 NDUFS2O75306 463 aa22.94■■□□□ 1.26
CLIC4-204ENST00000497755 MAOBP27338 520 aa22.94■■□□□ 1.26
CLIC4-204ENST00000497755 CUL4BQ13620 913 aa22.94■■□□□ 1.26
CLIC4-204ENST00000497755 TRIP6Q15654 476 aaKnown RBP22.94■■□□□ 1.26
CLIC4-204ENST00000497755 ZACNQ401N2 412 aa22.94■■□□□ 1.26
CLIC4-204ENST00000497755 UNC93AQ86WB7 457 aa22.94■■□□□ 1.26
CLIC4-204ENST00000497755 GOLGA5Q8TBA6 731 aa22.94■■□□□ 1.26
CLIC4-204ENST00000497755 ZNF396Q96N95 335 aaPredicted RBP22.94■■□□□ 1.26
CLIC4-204ENST00000497755 LSM7Q9UK45 103 aaKnown RBP22.94■■□□□ 1.26
CLIC4-204ENST00000497755 NUDT5Q9UKK9 219 aa22.94■■□□□ 1.26
CLIC4-204ENST00000497755 CELSR3Q9NYQ7 3312 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.93■■□□□ 1.26
CLIC4-204ENST00000497755 MDM4O15151 490 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 CYP26A1O43174 497 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 YEATS4O95619 227 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 RPN1P04843 607 aaKnown RBP22.93■■□□□ 1.26
CLIC4-204ENST00000497755 P4HA1P13674 534 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 PLA2G4AP47712 749 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 GOLGA8FQ08AF8 430 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 GOLGA8DPQ0D2H9 430 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 SYCP2LQ5T4T6 812 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 KLHDC10Q6PID8 442 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 Q6ZNB5 142 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 CLEC20AQ6ZU45 233 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 TMEM174Q8WUU8 243 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 FOXJ1Q92949 421 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 BHMTQ93088 406 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.93■■□□□ 1.267e-6■■■■■ 74.5
CLIC4-204ENST00000497755 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.93■■□□□ 1.26
CLIC4-204ENST00000497755 PLK2Q9NYY3 685 aa22.93■■□□□ 1.26
CLIC4-204ENST00000497755 A0A1W2PQH9 124 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 FAM200BP0CF97 657 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 RARGP13631 454 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 ADORA2BP29275 332 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 CD6P30203 668 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 AFMP43652 599 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 ASPAP45381 313 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 SPOPLQ6IQ16 392 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 KIAA1324Q6UXG2 1013 aaKnown RBP22.92■■□□□ 1.26
CLIC4-204ENST00000497755 SV2AQ7L0J3 742 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 METTL3Q86U44 580 aaKnown RBP22.92■■□□□ 1.26
CLIC4-204ENST00000497755 SLC9A9Q8IVB4 645 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 TAF4BQ92750 862 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 HNRNPABQ99729 332 aaKnown RBP22.92■■□□□ 1.26
CLIC4-204ENST00000497755 SUSD2Q9UGT4 822 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 DNMT3LQ9UJW3 386 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 STON1Q9Y6Q2 735 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 ITPR1Q14643 2758 aa22.92■■□□□ 1.26
CLIC4-204ENST00000497755 ACACAQ13085 2346 aa22.91■■□□□ 1.26
CLIC4-204ENST00000497755 ASS1P00966 412 aaKnown RBP22.91■■□□□ 1.26
CLIC4-204ENST00000497755 GNSP15586 552 aa22.91■■□□□ 1.26
CLIC4-204ENST00000497755 ACO1P21399 889 aaKnown RBP22.91■■□□□ 1.26
CLIC4-204ENST00000497755 STK4Q13043 487 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms