RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 GOLGA8SH3BPF8 625 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 MYL4P12829 197 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 NCAM1P13591 858 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 PDGFRAP16234 1089 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 GPD1P21695 349 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 FSHRP23945 695 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 SDC4P31431 198 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 GBP1P32455 592 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 FLT3P36888 993 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 COG7P83436 770 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 LEXMQ3ZCV2 418 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 HFE2Q6ZVN8 426 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 DDX42Q86XP3 938 aaKnown RBP eCLIP20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 MCEEQ96PE7 176 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 DESI2Q9BSY9 194 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 TRPV4Q9HBA0 871 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 OSER1Q9NX31 292 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 FAM50BQ9Y247 325 aa20.62■□□□□ 0.89
SCAMP3-209ENST00000497470 TRAV19A0A0A6YYK7 116 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 PIK3R2O00459 728 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 SLC2A3P11169 496 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 PCK1P35558 622 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 CCR2P41597 374 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 SLC1A1P43005 524 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 AIF1P55008 147 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 RPL7AP62424 266 aaKnown RBP20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 IFRD2Q12894 506 aaPredicted RBP20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 TAF5Q15542 800 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 DCAF6Q58WW2 860 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 KIAA1524Q8TCG1 905 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 RXFP2Q8WXD0 754 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 AZIN2Q96A70 460 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 E2F7Q96AV8 911 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 ZNF830Q96NB3 372 aaPredicted RBP20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 KIF9Q9HAQ2 790 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 OBP2AQ9NY56 170 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 MYO1AQ9UBC5 1043 aa20.61■□□□□ 0.89
SCAMP3-209ENST00000497470 A0A1W2PRU2 124 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 SLC5A9Q2M3M2 681 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 CCDC14Q49A88 953 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 SYPL2Q5VXT5 272 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 C11orf63Q6NUN7 778 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 RSRC2Q7L4I2 434 aaKnown RBP20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 CMTM8Q8IZV2 173 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 JOSD2Q8TAC2 188 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 DQX1Q8TE96 717 aaKnown RBP20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 NDRG1Q92597 394 aaKnown RBP20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 IRX2Q9BZI1 471 aaPredicted RBP20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 ANAPC7Q9UJX3 599 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 CDH7Q9ULB5 785 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 ARHGAP26Q9UNA1 814 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 NAALADL1Q9UQQ1 740 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 TLR6Q9Y2C9 796 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 ANAPC1Q9H1A4 1944 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 MYO16Q9Y6X6 1858 aa20.6■□□□□ 0.89
SCAMP3-209ENST00000497470 COCHO43405 550 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 PROSCO94903 275 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 LATS1O95835 1130 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 TRUB2O95900 331 aaKnown RBP20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 HDCP19113 662 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 PGFP49763 221 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 PPP2R5DQ14738 602 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 CBX2Q14781 532 aaPredicted RBP20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 TRIP4Q15650 581 aaPredicted RBP20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 ARHGAP29Q52LW3 1261 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 BRMS1LQ5PSV4 323 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 TRNP1Q6NT89 227 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 DNAAF5Q86Y56 855 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 PSTKQ8IV42 348 aaKnown RBP20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 REXO1L1PQ8IX06 675 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 SYCE1Q8N0S2 351 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 SLC46A2Q9BY10 475 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 MARCH2Q9P0N8 246 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 ZKSCAN5Q9Y2L8 839 aa20.59■□□□□ 0.89
SCAMP3-209ENST00000497470 OBSL1O75147 1896 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 IRAK2O43187 625 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 ATMINO43313 823 aaPredicted RBP20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 RNF8O76064 485 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 IGLV3-27P01718 113 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 CXCR3P49682 368 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 C10orf120Q5SQS8 335 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 GPR158Q5T848 1215 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 SLFN11Q7Z7L1 901 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 UNC45BQ8IWX7 931 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 NPAS3Q8IXF0 933 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 CCAR2Q8N163 923 aaKnown RBP20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 TPCN2Q8NHX9 752 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 PLD4Q96BZ4 506 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 TCEAL4Q96EI5 215 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 SLC39A13Q96H72 371 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 DCLK3Q9C098 648 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 OSGEPQ9NPF4 335 aa20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 USP15Q9Y4E8 981 aaPredicted RBP20.58■□□□□ 0.89
SCAMP3-209ENST00000497470 C2orf16Q68DN1 1984 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 MBTPS2O43462 519 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 GRAP2O75791 330 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 PSMA2P25787 234 aa20.57■□□□□ 0.88
SCAMP3-209ENST00000497470 RDXP35241 583 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms