RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 BHLHA9Q7RTU4 235 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 ZNF276Q8N554 614 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 TERB1Q8NA31 727 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 ANKRD52Q8NB46 1076 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 NETO1Q8TDF5 533 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 CEP63Q96MT8 703 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 UBXN6Q9BZV1 441 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 DNAI2Q9GZS0 605 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 SMOC1Q9H4F8 434 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 CLIC5Q9NZA1 410 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 DNMT3LQ9UJW3 386 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 LSM7Q9UK45 103 aaKnown RBP15.01□□□□□ -0.01
VTI1A-209ENST00000496445 TSPAN16Q9UKR8 245 aa15.01□□□□□ -0.01
VTI1A-209ENST00000496445 CEP192Q8TEP8 1941 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15□□□□□ -0.01
VTI1A-209ENST00000496445 CACNG3O60359 315 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 TYRP14679 529 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 SDHBP21912 280 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 BCKDHBP21953 392 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 BCAT1P54687 386 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 GOLGA8FQ08AF8 430 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 GOLGA8DPQ0D2H9 430 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 SF3A2Q15428 464 aaKnown RBP15□□□□□ -0.01
VTI1A-209ENST00000496445 HSF5Q4G112 596 aaPredicted RBP15□□□□□ -0.01
VTI1A-209ENST00000496445 BTBD8Q5XKL5 378 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 KLHL10Q6JEL2 608 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 TPGS1Q6ZTW0 290 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 MIB1Q86YT6 1006 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 OLIG1Q8TAK6 271 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 NELFBQ8WX92 580 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 RTKNQ9BST9 563 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 METTL14Q9HCE5 456 aaKnown RBP15□□□□□ -0.01
VTI1A-209ENST00000496445 RXFP3Q9NSD7 469 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 DEC1Q9P2X7 70 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 CTNND2Q9UQB3 1225 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 INVSQ9Y283 1065 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 PCDHGA5Q9Y5G8 931 aa15□□□□□ -0.01
VTI1A-209ENST00000496445 ASPMQ8IZT6 3477 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 DCDC2BA2VCK2 349 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 TBC1D3BA6NDS4 549 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 BIN1O00499 593 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 SLC30A4O14863 429 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 PMM2O15305 246 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 KLKB1P03952 638 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 ZNF806P0C7X5 589 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 RALAP11233 206 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 MPLP40238 635 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 PLA2G4AP47712 749 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 PDE4CQ08493 712 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 EFEMP1Q12805 493 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 CCDC40Q4G0X9 1142 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 SGO2Q562F6 1265 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 C10orf76Q5T2E6 689 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 PMS2CLQ68D20 193 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 GRAMD4Q6IC98 578 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 FOXR2Q6PJQ5 311 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 TOGARAM2Q6ZUX3 1019 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 TADA2BQ86TJ2 420 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 ZNF513Q8N8E2 541 aaPredicted RBP14.99□□□□□ -0.01
VTI1A-209ENST00000496445 LMO3Q8TAP4 145 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 NDRG1Q92597 394 aaKnown RBP14.99□□□□□ -0.01
VTI1A-209ENST00000496445 KAT5Q92993 513 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 CDK5RAP1Q96SZ6 601 aaKnown RBP14.99□□□□□ -0.01
VTI1A-209ENST00000496445 BBS2Q9BXC9 721 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 ULBP1Q9BZM6 244 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 DNAJC17Q9NVM6 304 aaKnown RBP14.99□□□□□ -0.01
VTI1A-209ENST00000496445 RASAL2Q9UJF2 1139 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 WDFY3Q8IZQ1 3526 aa14.99□□□□□ -0.01
VTI1A-209ENST00000496445 O00370 1275 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 XPO1O14980 1071 aaKnown RBP14.98□□□□□ -0.01
VTI1A-209ENST00000496445 CD19P15391 556 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 TBXAS1P24557 533 aaPredicted RBP14.98□□□□□ -0.01
VTI1A-209ENST00000496445 PPP1R2P41236 205 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 TKTL1P51854 596 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 YWHAEP62258 255 aaKnown RBP14.98□□□□□ -0.01
VTI1A-209ENST00000496445 BST2Q10589 180 aaKnown RBP14.98□□□□□ -0.01
VTI1A-209ENST00000496445 ELF2Q15723 593 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 PKDCCQ504Y2 493 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 EOGTQ5NDL2 527 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 EGFLAMQ63HQ2 1017 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 PM20D1Q6GTS8 502 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 TFAP2BQ92481 460 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 ZSWIM1Q9BR11 485 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 PLK2Q9NYY3 685 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 STARD13Q9Y3M8 1113 aa14.98□□□□□ -0.01
VTI1A-209ENST00000496445 MUC22E2RYF6 1773 aaPredicted RBP14.98□□□□□ -0.01
VTI1A-209ENST00000496445 TCRBV21S2A2A0A5A6 115 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 PRRT4C9JH25 899 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 RNF225M0QZC1 329 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 FOXD2O60548 495 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 ALDH1A2O94788 518 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 RHOBTB1O94844 696 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 ZBED1O96006 694 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 HMBSP08397 361 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 CISD3P0C7P0 127 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 VDRP11473 427 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 CORO1AP31146 461 aaKnown RBP14.97□□□□□ -0.01
VTI1A-209ENST00000496445 GBP1P32455 592 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 STX17P56962 302 aa14.97□□□□□ -0.01
VTI1A-209ENST00000496445 YWHAGP61981 247 aaKnown RBP eCLIP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms