RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 GPR62Q9BZJ7 368 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 ZCWPW1Q9H0M4 648 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 PCDH9Q9HC56 1237 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 PIGVQ9NUD9 493 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 MARCH5Q9NX47 278 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 STAP1Q9ULZ2 295 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 USP3Q9Y6I4 520 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 SYNJ2BP-COX16A0A087WUM0 186 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 APOL1O14791 398 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 IFNB1P01574 187 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 LTFP02788 710 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 RBP3P10745 1247 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 RDXP35241 583 aaKnown RBP14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 CAV1Q03135 178 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 GABPB1Q06547 395 aaPredicted RBP14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 GPS1Q13098 491 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 NME3Q13232 169 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 SLMAPQ14BN4 828 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 SLC39A12Q504Y0 691 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 CCDC25Q86WR0 208 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 BBOF1Q8ND07 529 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 SCAMP5Q8TAC9 235 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 P3H4Q92791 437 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 TOX2Q96NM4 488 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 CSPG4P5Q96PW8 444 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 FAM204AQ9H8W3 233 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 CWC15Q9P013 229 aaKnown RBP14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 COX16Q9P0S2 106 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 ADAM28Q9UKQ2 775 aa14.23□□□□□ -0.13
SPTBN1-205ENST00000496323 DCDC2CA8MYV0 355 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 GOLGA8KD6RF30 607 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 DNALI1O14645 258 aaPredicted RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 MCF2LO15068 1137 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 TRAPPC3O43617 180 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 AMHP03971 560 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 SHBGP04278 402 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 NCAM1P13591 858 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 SLC11A1P49279 550 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 NRLP54845 237 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 TERF2Q15554 542 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 VARS2Q5ST30 1063 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 DEFB128Q7Z7B8 93 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 ZC3H18Q86VM9 953 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 NPAS4Q8IUM7 802 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 SPATA2LQ8IUW3 424 aaPredicted RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 GOLGA6L1Q8N7Z2 621 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 FAM71DQ8N9W8 422 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 SLC7A14Q8TBB6 771 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 EDEM1Q92611 657 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 B3GALT6Q96L58 329 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 WDR6Q9NNW5 1121 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 PNPLA8Q9NP80 782 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 ANLNQ9NQW6 1124 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 LRFN2Q9ULH4 789 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 TDRD15B5MCY1 1934 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 TNFRSF10BO14763 440 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 CAPN9O14815 690 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 SYN3O14994 580 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 NUDT17P0C025 328 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 TGM2P21980 687 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 PBX3P40426 434 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 DEUP1Q05D60 604 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 MRPL58Q14197 206 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 SLC29A2Q14542 456 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 C4orf50Q6ZRC1 276 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 FAM43BQ6ZT52 329 aaPredicted RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 TMEM173Q86WV6 379 aaPredicted RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 PSTKQ8IV42 348 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 SCML4Q8N228 414 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 IRGQQ8WZA9 623 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 ZNF333Q96JL9 665 aa14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 DNAJC17Q9NVM6 304 aaKnown RBP14.22□□□□□ -0.13
SPTBN1-205ENST00000496323 RIPK2O43353 540 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 MAP3K6O95382 1288 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 ALDH2P05091 517 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 GOT1P17174 413 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 RPL22P35268 128 aaKnown RBP14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 PGFP49763 221 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 SLC10A2Q12908 348 aaPredicted RBP14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 FAM182AQ5T1J6 154 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 RNASEH2BQ5TBB1 312 aaKnown RBP14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 FAM171A1Q5VUB5 890 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 C1orf53Q5VUE5 145 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 BSPRYQ5W0U4 402 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.21□□□□□ -0.134e-9■□□□□ 8.4
SPTBN1-205ENST00000496323 RSAD2Q8WXG1 361 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 USP29Q9HBJ7 922 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 TMBIM4Q9HC24 238 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 TBX21Q9UL17 535 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 TPX2Q9ULW0 747 aaKnown RBP14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 HEY1Q9Y5J3 304 aa14.21□□□□□ -0.13
SPTBN1-205ENST00000496323 GOLGA6CA6NDK9 693 aa14.21□□□□□ -0.14
SPTBN1-205ENST00000496323 TBKBP1A7MCY6 615 aa14.21□□□□□ -0.14
SPTBN1-205ENST00000496323 GALTP07902 379 aa14.21□□□□□ -0.14
SPTBN1-205ENST00000496323 GOLGA6DP0CG33 693 aa14.21□□□□□ -0.14
SPTBN1-205ENST00000496323 GRIK1P39086 918 aa14.21□□□□□ -0.14
SPTBN1-205ENST00000496323 SLC5A3P53794 718 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms