RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TULP3O75386 442 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 KIR2DL1P43626 348 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-209ENST00000495835 PXNP49023 591 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-209ENST00000495835 YWHAGP61981 247 aaKnown RBP eCLIP25.43■■□□□ 1.66
HLA-C-209ENST00000495835 PUM1Q14671 1186 aaKnown RBP eCLIP25.43■■□□□ 1.66
HLA-C-209ENST00000495835 CNGA2Q16280 664 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 CRY1Q16526 586 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 LPAL2Q16609 132 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 PKDCCQ504Y2 493 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 SMYD5Q6GMV2 418 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 FAM160A2Q8N612 972 aaPredicted RBP25.43■■□□□ 1.66
HLA-C-209ENST00000495835 TSTD1Q8NFU3 115 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 HHIPQ96QV1 700 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 STRIP2Q9ULQ0 834 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 PCDHB4Q9Y5E5 795 aa25.43■■□□□ 1.66
HLA-C-209ENST00000495835 CACNG3O60359 315 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 STC2O76061 302 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 HOXC13P31276 330 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 CHKAP35790 457 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 SEC13P55735 322 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 EOGTQ5NDL2 527 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 TRMT11Q7Z4G4 463 aaKnown RBP25.42■■□□□ 1.66
HLA-C-209ENST00000495835 C11orf74Q86VG3 221 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 RASSF3Q86WH2 238 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 IL17RCQ8NAC3 791 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 MLKLQ8NB16 471 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 DLL3Q9NYJ7 618 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 NUDT5Q9UKK9 219 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 STARD13Q9Y3M8 1113 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 RALGAPA1Q6GYQ0 2036 aa25.42■■□□□ 1.66
HLA-C-209ENST00000495835 TBC1D3BA6NDS4 549 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 ALDH1A2O94788 518 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 CHRM1P11229 460 aaPredicted RBP25.41■■□□□ 1.66
HLA-C-209ENST00000495835 CSRP2Q16527 193 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 CAMK4Q16566 473 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 MIB1Q86YT6 1006 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 NAT16Q8N8M0 369 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 TERB1Q8NA31 727 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 RMDN1Q96DB5 314 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 FAM81BQ96LP2 452 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 BBS2Q9BXC9 721 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 CNGB3Q9NQW8 809 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 POLR3BQ9NW08 1133 aaPredicted RBP25.41■■□□□ 1.66
HLA-C-209ENST00000495835 USP18Q9UMW8 372 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 CNTN6Q9UQ52 1028 aa25.41■■□□□ 1.66
HLA-C-209ENST00000495835 MDM4O15151 490 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 TYRP14679 529 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 SPEM2Q0P670 501 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 MESP2Q0VG99 397 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 EFEMP1Q12805 493 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 RSRC2Q7L4I2 434 aaKnown RBP25.4■■□□□ 1.66
HLA-C-209ENST00000495835 SLC35F5Q8WV83 523 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 CNOT6LQ96LI5 555 aaKnown RBP25.4■■□□□ 1.66
HLA-C-209ENST00000495835 IPO9Q96P70 1041 aaKnown RBP25.4■■□□□ 1.66
HLA-C-209ENST00000495835 ULBP1Q9BZM6 244 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 POLMQ9NP87 494 aaPredicted RBP25.4■■□□□ 1.66
HLA-C-209ENST00000495835 PARD6AQ9NPB6 346 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 MARCH2Q9P0N8 246 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 RASAL2Q9UJF2 1139 aa25.4■■□□□ 1.66
HLA-C-209ENST00000495835 CEP250Q9BV73 2442 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 TULP2O00295 520 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 TIE1P35590 1138 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 KDSRQ06136 332 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 USP39Q53GS9 565 aaKnown RBP25.39■■□□□ 1.66
HLA-C-209ENST00000495835 GRAMD4Q6IC98 578 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 ENOSF1Q7L5Y1 443 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 SIX6OS1Q8N1H7 587 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 ALLCQ8N6M5 410 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 TXNDC5Q8NBS9 432 aaKnown RBP25.39■■□□□ 1.66
HLA-C-209ENST00000495835 UBA3Q8TBC4 463 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 IRGQQ8WZA9 623 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 PLD4Q96BZ4 506 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 HSFY1Q96LI6 401 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 ABCC13Q9NSE7 274 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 SEMA4GQ9NTN9 838 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 FBXO10Q9UK96 956 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.39■■□□□ 1.66
HLA-C-209ENST00000495835 PCDHGA5Q9Y5G8 931 aa25.39■■□□□ 1.66
HLA-C-209ENST00000495835 MYO18AQ92614 2054 aaKnown RBP25.38■■□□□ 1.65
HLA-C-209ENST00000495835 NEDD8-MDP1E9PL57 170 aa25.38■■□□□ 1.65
HLA-C-209ENST00000495835 RNF225M0QZC1 329 aaPredicted RBP25.38■■□□□ 1.65
HLA-C-209ENST00000495835 KLF8O95600 359 aaPredicted RBP25.38■■□□□ 1.65
HLA-C-209ENST00000495835 ZNF132P52740 706 aa25.38■■□□□ 1.65
HLA-C-209ENST00000495835 MEA1Q16626 185 aa25.38■■□□□ 1.65
HLA-C-209ENST00000495835 CLEC17AQ6ZS10 378 aa25.38■■□□□ 1.65
HLA-C-209ENST00000495835 BHLHA9Q7RTU4 235 aa25.38■■□□□ 1.65
HLA-C-209ENST00000495835 CCDC33Q8N5R6 958 aa25.38■■□□□ 1.65
HLA-C-209ENST00000495835 RBBP8NLQ8NC74 664 aaPredicted RBP25.38■■□□□ 1.65
HLA-C-209ENST00000495835 TFAP2BQ92481 460 aa25.38■■□□□ 1.65
HLA-C-209ENST00000495835 DNAJC17Q9NVM6 304 aaKnown RBP25.38■■□□□ 1.65
HLA-C-209ENST00000495835 RHOBTB1O94844 696 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 EPN2O95208 641 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 KLKB1P03952 638 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 PRKCSHP14314 528 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-209ENST00000495835 ANP32AP39687 249 aaKnown RBP25.37■■□□□ 1.65
HLA-C-209ENST00000495835 ADIGQ0VDE8 80 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 PLK5Q496M5 336 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 EMC10Q5UCC4 262 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 TPGS1Q6ZTW0 290 aa25.37■■□□□ 1.65
HLA-C-209ENST00000495835 RRAGAQ7L523 313 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms