RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 USP13Q92995 863 aaPredicted RBP6.72□□□□□ -1.33
CCDC39-207ENST00000495817 ZBTB45Q96K62 511 aaPredicted RBP6.72□□□□□ -1.33
CCDC39-207ENST00000495817 PBKQ96KB5 322 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 C17orf80Q9BSJ5 609 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 VN1R3Q9BXE9 311 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 MLXIPQ9HAP2 919 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 ALG13Q9NP73 1137 aaKnown RBP6.72□□□□□ -1.33
CCDC39-207ENST00000495817 SLC17A6Q9P2U8 582 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 LPAR3Q9UBY5 353 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 USP22Q9UPT9 525 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 FER1L4A9Z1Z3 1794 aa6.72□□□□□ -1.33
CCDC39-207ENST00000495817 J3KTA2 159 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 EIF3FO00303 357 aaPredicted RBP6.71□□□□□ -1.34
CCDC39-207ENST00000495817 ADD2P35612 726 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 GRIA3P42263 894 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 MTHFSP49914 203 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 ATXN1P54253 815 aaKnown RBP6.71□□□□□ -1.34
CCDC39-207ENST00000495817 NANOS3P60323 173 aaKnown RBP6.71□□□□□ -1.34
CCDC39-207ENST00000495817 FHL3Q13643 280 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 TAF12Q16514 161 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 DEPDC1Q5TB30 811 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 DNAJC10Q8IXB1 793 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 FTSJ3Q8IY81 847 aaKnown RBP6.71□□□□□ -1.34
CCDC39-207ENST00000495817 THAP4Q8WY91 577 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 NELL1Q92832 810 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 RSPRY1Q96DX4 576 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 CRAMP1Q96RY5 1269 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 EPS8L2Q9H6S3 715 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 SALL3Q9BXA9 1300 aa6.71□□□□□ -1.34
CCDC39-207ENST00000495817 PNMA6EA0A0J9YXQ4 647 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 A0A1B0GVC2 190 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 AGPSO00116 658 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 PPM1DO15297 605 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 URI1O94763 535 aaPredicted RBP6.7□□□□□ -1.34
CCDC39-207ENST00000495817 GYS1P13807 737 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 CD19P15391 556 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 NTSR1P30989 418 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 HTR7P34969 479 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 CLK3P49761 638 aaKnown RBP6.7□□□□□ -1.34
CCDC39-207ENST00000495817 CDK7P50613 346 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 RINT1Q6NUQ1 792 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 RINLQ6ZS11 566 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 RAB11FIP2Q7L804 512 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 PEG10Q86TG7 708 aaKnown RBP6.7□□□□□ -1.34
CCDC39-207ENST00000495817 RAB11FIP4Q86YS3 637 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 SCAMP5Q8TAC9 235 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 FKBP10Q96AY3 582 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 RIMKLBQ9ULI2 386 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 NFU1Q9UMS0 254 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 DRG1Q9Y295 367 aaKnown RBP6.7□□□□□ -1.34
CCDC39-207ENST00000495817 SLC27A6Q9Y2P4 619 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 ADGRA2Q96PE1 1338 aa6.7□□□□□ -1.34
CCDC39-207ENST00000495817 HMX3A6NHT5 357 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 GCOM1H8Y6P7 765 aaPredicted RBP6.69□□□□□ -1.34
CCDC39-207ENST00000495817 SLC16A3O15427 465 aaKnown RBP6.69□□□□□ -1.34
CCDC39-207ENST00000495817 CBFA2T3O75081 653 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 NXPH3O95157 252 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 CHRM2P08172 466 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 PLA2G5P39877 138 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 HNRNPMP52272 730 aaKnown RBP eCLIP6.69□□□□□ -1.34
CCDC39-207ENST00000495817 ELLP55199 621 aaPredicted RBP6.69□□□□□ -1.34
CCDC39-207ENST00000495817 SP2Q02086 613 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 CSHL1Q14406 222 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 GRM4Q14833 912 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 ACOX1Q15067 660 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 ANKRD45Q5TZF3 282 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 JAKMIP3Q5VZ66 844 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 SLC9A4Q6AI14 798 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 NFRKBQ6P4R8 1299 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 CLEC9AQ6UXN8 241 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 ADGRG3Q86Y34 549 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 OR6Y1Q8NGX8 325 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 SOCS4Q8WXH5 440 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 TFAP2BQ92481 460 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 PYM1Q9BRP8 204 aaKnown RBP6.69□□□□□ -1.34
CCDC39-207ENST00000495817 GLOD4Q9HC38 313 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 SEPSECSQ9HD40 501 aaKnown RBP6.69□□□□□ -1.34
CCDC39-207ENST00000495817 FSCN3Q9NQT6 498 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 EHD3Q9NZN3 535 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 STEAP1Q9UHE8 339 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 ENTPD2Q9Y5L3 495 aa6.69□□□□□ -1.34
CCDC39-207ENST00000495817 EFCAB8A8MWE9 144 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 TAF5LO75529 589 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 KLRK1P26718 216 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 DDIT3P35638 169 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 PAPOLAP51003 745 aaKnown RBP6.68□□□□□ -1.34
CCDC39-207ENST00000495817 SOX10P56693 466 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 TBX2Q13207 712 aaPredicted RBP6.68□□□□□ -1.34
CCDC39-207ENST00000495817 LY6KQ17RY6 165 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 PLAC9Q5JTB6 97 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 ZNF618Q5T7W0 954 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 HERC6Q8IVU3 1022 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 FSTL5Q8N475 847 aaPredicted RBP6.68□□□□□ -1.34
CCDC39-207ENST00000495817 GLG1Q92896 1179 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 UROC1Q96N76 676 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 TRAPPC9Q96Q05 1148 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 TWSG1Q9GZX9 223 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 RXFP3Q9NSD7 469 aa6.68□□□□□ -1.34
CCDC39-207ENST00000495817 NKX1-2Q9UD57 310 aaPredicted RBP6.68□□□□□ -1.34
CCDC39-207ENST00000495817 FEM1BQ9UK73 627 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms