RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 VCPP55072 806 aaKnown RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 USP4Q13107 963 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 MEA1Q16626 185 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 CLEC16AQ2KHT3 1053 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 NAIF1Q69YI7 327 aaPredicted RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 XYLT1Q86Y38 959 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 BBS7Q8IWZ6 715 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 DEFB106AQ8N104 65 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 EMC1Q8N766 993 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 DEPDC1BQ8WUY9 529 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 EDAQ92838 391 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 KLF16Q9BXK1 252 aaPredicted RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 TICRRQ7Z2Z1 1910 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 PI4K2BG5E9Z4 385 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 LSM8O95777 96 aaKnown RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 ALADP13716 330 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 TFE3P19532 575 aaPredicted RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 YWHAZP63104 245 aaKnown RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 HGSNATQ68CP4 663 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 FLCNQ8NFG4 579 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 ANP32EQ9BTT0 268 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 KIF9Q9HAQ2 790 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 POPDC2Q9HBU9 364 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 HPS4Q9NQG7 708 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 METTL5Q9NRN9 209 aaKnown RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 THG1LQ9NWX6 298 aaKnown RBP11.63□□□□□ -0.55
APTX-230ENST00000494649 ADAMTS1Q9UHI8 967 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 ZMYM5Q9UJ78 669 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 MYO6Q9UM54 1294 aa11.63□□□□□ -0.55
APTX-230ENST00000494649 TECTAO75443 2155 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 ARNTLO00327 626 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 DDX3XO00571 662 aaKnown RBP eCLIP11.62□□□□□ -0.554e-13■□□□□ 9.3
APTX-230ENST00000494649 TRDMT1O14717 391 aaKnown RBP11.62□□□□□ -0.55
APTX-230ENST00000494649 STC2O76061 302 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 IFNAR2P48551 515 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 KPNA1P52294 538 aaPredicted RBP11.62□□□□□ -0.55
APTX-230ENST00000494649 SLC6A3Q01959 620 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 SIGLEC14Q08ET2 396 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
APTX-230ENST00000494649 SLC44A4Q53GD3 710 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 TRIM67Q6ZTA4 783 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 TPGS1Q6ZTW0 290 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 TPRG1Q6ZUI0 275 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 TAC4Q86UU9 113 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 DENND1CQ8IV53 801 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 DRC7Q8IY82 874 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 UBALD2Q8IYN6 164 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 SPC24Q8NBT2 197 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 CSGALNACT1Q8TDX6 532 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 DQX1Q8TE96 717 aaKnown RBP11.62□□□□□ -0.55
APTX-230ENST00000494649 OSCP1Q8WVF1 389 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 IRGQQ8WZA9 623 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 IRF7Q92985 503 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 E2F7Q96AV8 911 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 FAM83CQ9BQN1 747 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 SYT11Q9BT88 431 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 EDEM3Q9BZQ6 932 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 ARHGEF3Q9NR81 526 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 ADAM22Q9P0K1 906 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 ARHGAP20Q9P2F6 1191 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
APTX-230ENST00000494649 HELZP42694 1942 aaKnown RBP11.62□□□□□ -0.55
APTX-230ENST00000494649 CHADO15335 359 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 MFAP3LO75121 409 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 ADCY5O95622 1261 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 MOCS2O96007 188 aaPredicted RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 KLKB1P03952 638 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 MMP8P22894 467 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 WEE1P30291 646 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 CORO1AP31146 461 aaKnown RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 CENPCQ03188 943 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 NME3Q13232 169 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 ARHGAP29Q52LW3 1261 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 WDR59Q6PJI9 974 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 TOGARAM2Q6ZUX3 1019 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 TADA2BQ86TJ2 420 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 ADAM33Q9BZ11 813 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 FOXQ1Q9C009 403 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 MFSD1Q9H3U5 465 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 C11orf16Q9NQ32 467 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 ABHD10Q9NUJ1 306 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 OBP2AQ9NY56 170 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 CALCOCO1Q9P1Z2 691 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 PIAS3Q9Y6X2 628 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 KIF26AQ9ULI4 1882 aaPredicted RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 SOBPA7XYQ1 873 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 SART1O43290 800 aaKnown RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 TPM1P09493 284 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 ABCB4P21439 1286 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 FLT3P36888 993 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 PRKCIP41743 596 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 ATXN1P54253 815 aaKnown RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 GFPT1Q06210 699 aaPredicted RBP11.61□□□□□ -0.55
APTX-230ENST00000494649 RUNX3Q13761 415 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 EML3Q32P44 896 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 TRNP1Q6NT89 227 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 TXNDC11Q6PKC3 985 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 TRIM72Q6ZMU5 477 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 SCML4Q8N228 414 aa11.61□□□□□ -0.55
APTX-230ENST00000494649 JOSD2Q8TAC2 188 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms