RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 BBS7Q8IWZ6 715 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 EHBP1Q8NDI1 1231 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 RUBCNQ92622 972 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 WBP2Q969T9 261 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 SAMSN1Q9NSI8 373 aaKnown RBP13.85□□□□□ -0.19
ERCC3-209ENST00000494464 LSM7Q9UK45 103 aaKnown RBP13.85□□□□□ -0.19
ERCC3-209ENST00000494464 OTOGLQ3ZCN5 2332 aa13.85□□□□□ -0.19
ERCC3-209ENST00000494464 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-209ENST00000494464 CDK11BP21127 795 aaKnown RBP13.84□□□□□ -0.19
ERCC3-209ENST00000494464 TKTL1P51854 596 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 ZNF132P52740 706 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 GAD2Q05329 585 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 DMWDQ09019 674 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 C10orf120Q5SQS8 335 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 LY6G5CQ5SRR4 150 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 PM20D1Q6GTS8 502 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 LCLAT1Q6UWP7 414 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 SYT13Q7L8C5 426 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 APTXQ7Z2E3 356 aaKnown RBP13.84□□□□□ -0.19
ERCC3-209ENST00000494464 TMC6Q7Z403 805 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 WDR5BQ86VZ2 330 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 C12orf40Q86WS4 652 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 ARHGEF19Q8IW93 802 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 CAMKK1Q8N5S9 505 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 RPLP0P6Q8NHW5 317 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 KCTD13Q8WZ19 329 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 KAT5Q92993 513 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 ZNF830Q96NB3 372 aaPredicted RBP13.84□□□□□ -0.19
ERCC3-209ENST00000494464 PNKPQ96T60 521 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 INTS2Q9H0H0 1204 aaKnown RBP13.84□□□□□ -0.19
ERCC3-209ENST00000494464 SPHK2Q9NRA0 654 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 CNTN6Q9UQ52 1028 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 PCDHB4Q9Y5E5 795 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 RIF1Q5UIP0 2472 aaKnown RBP13.84□□□□□ -0.19
ERCC3-209ENST00000494464 GVINP1Q7Z2Y8 2422 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 MYOFQ9NZM1 2061 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 FRYLO94915 3013 aa13.84□□□□□ -0.19
ERCC3-209ENST00000494464 TULP2O00295 520 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 MDM4O15151 490 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 ZBED1O96006 694 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 FNTBP49356 437 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 TPD52L1Q16890 204 aaPredicted RBP13.83□□□□□ -0.19
ERCC3-209ENST00000494464 Q6ZNB5 142 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 BHLHA9Q7RTU4 235 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 LRRC8AQ8IWT6 810 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 ETFBKMTQ8IXQ9 262 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 SCML4Q8N228 414 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 PHTF2Q8N3S3 785 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 RBBP8NLQ8NC74 664 aaPredicted RBP13.83□□□□□ -0.19
ERCC3-209ENST00000494464 KIAA1524Q8TCG1 905 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 TFAP2BQ92481 460 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 KREMEN1Q96MU8 473 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.19
ERCC3-209ENST00000494464 ULBP1Q9BZM6 244 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 THAP9Q9H5L6 903 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 LRRC4Q9HBW1 653 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 MARK1Q9P0L2 795 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 LIMA1Q9UHB6 759 aaKnown RBP13.83□□□□□ -0.19
ERCC3-209ENST00000494464 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.83□□□□□ -0.19
ERCC3-209ENST00000494464 SLC8A2Q9UPR5 921 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 EML5Q05BV3 1969 aa13.83□□□□□ -0.19
ERCC3-209ENST00000494464 A0A0A0MRY4 1105 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 GTPBP10A4D1E9 387 aaKnown RBP13.83□□□□□ -0.2
ERCC3-209ENST00000494464 LRRC10BA6NIK2 292 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 K7EQS6 105 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 STC2O76061 302 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 APODP05090 189 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-209ENST00000494464 EEF1GP26641 437 aaKnown RBP13.83□□□□□ -0.2
ERCC3-209ENST00000494464 YWHAGP61981 247 aaKnown RBP eCLIP13.83□□□□□ -0.2
ERCC3-209ENST00000494464 COG7P83436 770 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 ADIGQ0VDE8 80 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 NR1I3Q14994 352 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 CNGA2Q16280 664 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 HSF5Q4G112 596 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-209ENST00000494464 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.2
ERCC3-209ENST00000494464 BTBD8Q5XKL5 378 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 TRIM65Q6PJ69 517 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 RRAGAQ7L523 313 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 ENOSF1Q7L5Y1 443 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 IRF2BP1Q8IU81 584 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 USP33Q8TEY7 942 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 SLC35F5Q8WV83 523 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
ERCC3-209ENST00000494464 FAM81BQ96LP2 452 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 ZSWIM1Q9BR11 485 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 CNGB3Q9NQW8 809 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 ARHGEF4Q9NR80 690 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 SPTLC3Q9NUV7 552 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 NCDNQ9UBB6 729 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 NUDT5Q9UKK9 219 aa13.83□□□□□ -0.2
ERCC3-209ENST00000494464 ZNF292O60281 2723 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 ATG2BQ96BY7 2078 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 RNF225M0QZC1 329 aaPredicted RBP13.82□□□□□ -0.2
ERCC3-209ENST00000494464 CACNG3O60359 315 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 KAT7O95251 611 aa13.82□□□□□ -0.2
ERCC3-209ENST00000494464 BRD2P25440 801 aaKnown RBP13.82□□□□□ -0.2
ERCC3-209ENST00000494464 GRIA2P42262 883 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms