RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MANEALQ5VSG8 457 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 TLDC1Q6P9B6 456 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 CRTC1Q6UUV9 634 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 CLEC4GQ6UXB4 293 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 PCGF5Q86SE9 256 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 AMIGO2Q86SJ2 522 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 MYLK4Q86YV6 388 aaPredicted RBP2.77□□□□□ -1.97
LMNB1-207ENST00000494185 SYTL1Q8IYJ3 562 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 FAM71DQ8N9W8 422 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 VPS37AQ8NEZ2 397 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 SEMA6DQ8NFY4 1073 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 GPR150Q8NGU9 434 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 ADAMTS18Q8TE60 1221 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 HIC2Q96JB3 615 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 ZBTB45Q96K62 511 aaPredicted RBP2.77□□□□□ -1.97
LMNB1-207ENST00000494185 FAM227BQ96M60 508 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 SH2D3AQ9BRG2 576 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 RNF26Q9BY78 433 aaPredicted RBP2.77□□□□□ -1.97
LMNB1-207ENST00000494185 CIPCQ9C0C6 399 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 TM7SF3Q9NS93 570 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 GJB4Q9NTQ9 266 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 TERF2IPQ9NYB0 399 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 FLRT1Q9NZU1 646 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 LUZP4Q9P127 313 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 MGAT4CQ9UBM8 478 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 PNMA2Q9UL42 364 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 GTF2A1LQ9UNN4 478 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 LZTS1Q9Y250 596 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 LRCH1Q9Y2L9 728 aa2.77□□□□□ -1.97
LMNB1-207ENST00000494185 A0A087WZ62 844 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 FAM234BA2RU67 622 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 EXOC5O00471 708 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 MGST3O14880 152 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 DSCR3O14972 297 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 ADAMTS3O15072 1205 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 KCNQ3O43525 872 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 PIP5K1CO60331 668 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 PMPCBO75439 489 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 VNN1O95497 513 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 NDST3O95803 873 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 GLP2RO95838 553 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 VIPP01282 170 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 ERBB2P04626 1255 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 GABRB3P28472 473 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 PCSK6P29122 969 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 PPM1AP35813 382 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 TECP42680 631 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 GSTM5P46439 218 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 CCT5P48643 541 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 TIRAPP58753 221 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 E2F1Q01094 437 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 COL10A1Q03692 680 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 NSUN2Q08J23 767 aaKnown RBP eCLIP2.76□□□□□ -1.97
LMNB1-207ENST00000494185 CCDC15Q0P6D6 951 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 FOXF2Q12947 444 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 KCNB1Q14721 858 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 STARD3Q14849 445 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 MAPRE1Q15691 268 aaKnown RBP2.76□□□□□ -1.97
LMNB1-207ENST00000494185 PDCD2Q16342 344 aaPredicted RBP2.76□□□□□ -1.97
LMNB1-207ENST00000494185 SRSF7Q16629 238 aaKnown RBP eCLIP2.76□□□□□ -1.97
LMNB1-207ENST00000494185 CCDC142Q17RM4 750 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.76□□□□□ -1.97
LMNB1-207ENST00000494185 PRAMEF17Q5VTA0 474 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 CCDC70Q6NSX1 233 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 MIS18BP1Q6P0N0 1132 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 KIRREL2Q6UWL6 708 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 NAPRTQ6XQN6 538 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 ZNF788Q6ZQV5 615 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 GATAD2AQ86YP4 633 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 CCDC28AQ8IWP9 274 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 UEVLDQ8IX04 471 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 PNPLA1Q8N8W4 532 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 TEX19Q8NA77 164 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 CYP2W1Q8TAV3 490 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 POF1BQ8WVV4 589 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 OVCA2Q8WZ82 227 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 TMEM41AQ96HV5 264 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 SCLT1Q96NL6 688 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 ASB2Q96Q27 587 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 ISCA1Q9BUE6 129 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 STK33Q9BYT3 514 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 TRIM2Q9C040 744 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.76□□□□□ -1.978e-7■■■□□ 17.2
LMNB1-207ENST00000494185 PCDHAC1Q9H158 963 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 SYNPO2LQ9H987 977 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 HELLSQ9NRZ9 838 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 DLL3Q9NYJ7 618 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 RGL1Q9NZL6 768 aa2.76□□□□□ -1.97
LMNB1-207ENST00000494185 MAGED2Q9UNF1 606 aaPredicted RBP2.76□□□□□ -1.97
LMNB1-207ENST00000494185 hCG_1642624A0A1W2PR95 340 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 F5H423 210 aaPredicted RBP2.75□□□□□ -1.97
LMNB1-207ENST00000494185 SMIM22K7EJ46 135 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 OVOL3O00110 214 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 AGPSO00116 658 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 AP4M1O00189 453 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 PLA2G6O60733 806 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 NBNO60934 754 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 TUBB4AP04350 444 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 CD63P08962 238 aa2.75□□□□□ -1.97
LMNB1-207ENST00000494185 JUPP14923 745 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms