RNA–Protein interactions for RNA: ENST00000494058.5

SKIV2L-215, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 867 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-215	ENST00000494058	SLC12A6	Q9UHW9	1150 aa		13.74	□□□□□ -0.21
SKIV2L-215	ENST00000494058	INTU	Q9ULD6	942 aa		13.74	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SH3BP1	Q9Y3L3	701 aa		13.74	□□□□□ -0.21
SKIV2L-215	ENST00000494058	C2orf16	Q68DN1	1984 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ANHX	E9PGG2	379 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	DAB1	O75553	588 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	GABBR2	O75899	941 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PTMA	P06454	111 aa	Known RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	H2AFZ	P0C0S5	128 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	HARS2	P49590	506 aa	Known RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	RNASE9	P60153	205 aa	Known RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	GFPT1	Q06210	699 aa	Predicted RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	EFEMP1	Q12805	493 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ASTE1	Q2TB18	679 aa	Predicted RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	H2AFV	Q71UI9	128 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	MFSD6L	Q8IWD5	586 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	BPIFB1	Q8TDL5	484 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	CLEC4C	Q8WTT0	213 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	EDEM1	Q92611	657 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PLD4	Q96BZ4	506 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ZNF653	Q96CK0	615 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	OTUB2	Q96DC9	234 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	CALR3	Q96L12	384 aa	Known RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ZSWIM3	Q96MP5	696 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SLC2A13	Q96QE2	648 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	CYP2S1	Q96SQ9	504 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	RNF38	Q9H0F5	515 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SMOC2	Q9H3U7	446 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	CNOT8	Q9UFF9	292 aa	Known RBP	13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	RASAL2	Q9UJF2	1139 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	CPQ	Q9Y646	472 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	EYS	Q5T1H1	3165 aa		13.73	□□□□□ -0.21
SKIV2L-215	ENST00000494058	GREB1	Q4ZG55	1949 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	E2F8	A0AVK6	867 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	C19orf67	A6NJJ6	358 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	EIF3CL	B5ME19	914 aa	Known RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PSMC3	P17980	439 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	FECH	P22830	423 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SP100	P23497	879 aa	Predicted RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SDC4	P31431	198 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PFKP	Q01813	784 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	RING1	Q06587	406 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PTP4A2	Q12974	167 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SLC25A52	Q3SY17	297 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ARHGAP29	Q52LW3	1261 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	STXBP5	Q5T5C0	1151 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	NUGGC	Q68CJ6	796 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	BHLHA9	Q7RTU4	235 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	MIB1	Q86YT6	1006 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	DEFB106A	Q8N104	65 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	NDRG1	Q92597	394 aa	Known RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	USP13	Q92995	863 aa	Predicted RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	EXOC4	Q96A65	974 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	EIF3C	Q99613	913 aa	Known RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	DDX50	Q9BQ39	737 aa	Known RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	TRMT61B	Q9BVS5	477 aa	Known RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	FAM204A	Q9H8W3	233 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	KCNK12	Q9HB15	430 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	OSER1	Q9NX31	292 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	LIMD1	Q9UGP4	676 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	TLR6	Q9Y2C9	796 aa		13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.72	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SLC12A8	A0AV02	714 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	HEPACAM2	A8MVW5	462 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	LEFTY2	O00292	366 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ZNF263	O14978	683 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	NDUFA10	O95299	355 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	LCA5L	O95447	670 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	LATS1	O95835	1130 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PDGFRA	P16234	1089 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	ABCB4	P21439	1286 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	RRM1	P23921	792 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	MAGEA1	P43355	309 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	AMPD2	Q01433	879 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	NR1H3	Q13133	447 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	TDG	Q13569	410 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	HTR4	Q13639	388 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PDGFRL	Q15198	375 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	TRIP4	Q15650	581 aa	Predicted RBP	13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PLEKHA7	Q6IQ23	1121 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	PARM1	Q6UWI2	310 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	HFE2	Q6ZVN8	426 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	RHOT2	Q8IXI1	618 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	GJD3	Q8N144	294 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SH3RF2	Q8TEC5	729 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	IRF7	Q92985	503 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	RNF34	Q969K3	372 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	DDX23	Q9BUQ8	820 aa	Known RBP	13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	KLF16	Q9BXK1	252 aa	Predicted RBP	13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	METTL5	Q9NRN9	209 aa	Known RBP	13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	TAS2R14	Q9NYV8	317 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	UVRAG	Q9P2Y5	699 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	TJP2	Q9UDY2	1190 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	TMEM59L	Q9UK28	342 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	SORCS3	Q9UPU3	1222 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	NAALADL1	Q9UQQ1	740 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	NUMBL	Q9Y6R0	609 aa		13.71	□□□□□ -0.21
SKIV2L-215	ENST00000494058	DENND4A	Q7Z401	1863 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms