RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TSPAN16Q9UKR8 245 aa10.26□□□□□ -0.77
UFD1-210ENST00000494054 NCOR2Q9Y618 2525 aa10.26□□□□□ -0.77
UFD1-210ENST00000494054 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.25□□□□□ -0.77
UFD1-210ENST00000494054 TBC1D3BA6NDS4 549 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 NEDD8-MDP1E9PL57 170 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
UFD1-210ENST00000494054 GABBR2O75899 941 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 STC2O76061 302 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 CALCAP01258 141 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 RALAP11233 206 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 TYRP14679 529 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 CD19P15391 556 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 TKTL1P51854 596 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 EFEMP1Q12805 493 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 CCDC40Q4G0X9 1142 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 SGO2Q562F6 1265 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 PLA2G2CQ5R387 149 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 C10orf76Q5T2E6 689 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 PM20D1Q6GTS8 502 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 TOGARAM2Q6ZUX3 1019 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 BHLHA9Q7RTU4 235 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 TERB1Q8NA31 727 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 MDGA1Q8NFP4 955 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 OLIG1Q8TAK6 271 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 TFAP2BQ92481 460 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 CNOT6LQ96LI5 555 aaKnown RBP10.25□□□□□ -0.77
UFD1-210ENST00000494054 ZSWIM1Q9BR11 485 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 BBS2Q9BXC9 721 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 ULBP1Q9BZM6 244 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 SMOC1Q9H4F8 434 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 RXFP3Q9NSD7 469 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 MARK1Q9P0L2 795 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 RASAL2Q9UJF2 1139 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 LSM7Q9UK45 103 aaKnown RBP10.25□□□□□ -0.77
UFD1-210ENST00000494054 CDV3Q9UKY7 258 aaKnown RBP10.25□□□□□ -0.77
UFD1-210ENST00000494054 CTNND2Q9UQB3 1225 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 DMXL1Q9Y485 3027 aa10.25□□□□□ -0.77
UFD1-210ENST00000494054 SPTBN2O15020 2390 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 SPAG17Q6Q759 2223 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 O00370 1275 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 XPO1O14980 1071 aaKnown RBP10.24□□□□□ -0.77
UFD1-210ENST00000494054 PMM2O15305 246 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 CACNG3O60359 315 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 ZBED1O96006 694 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 HMBSP08397 361 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 CISD3P0C7P0 127 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 ZNF806P0C7X5 589 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 VDRP11473 427 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 SDHBP21912 280 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 BCKDHBP21953 392 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 PPP1R2P41236 205 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 WASP42768 502 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 YWHAGP61981 247 aaKnown RBP eCLIP10.24□□□□□ -0.77
UFD1-210ENST00000494054 GOLGA8FQ08AF8 430 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 GOLGA8DPQ0D2H9 430 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 HSF5Q4G112 596 aaPredicted RBP10.24□□□□□ -0.77
UFD1-210ENST00000494054 PKDCCQ504Y2 493 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 EOGTQ5NDL2 527 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 GRAMD4Q6IC98 578 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 FOXR2Q6PJQ5 311 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 TMEM270Q6UE05 265 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 ARHGEF19Q8IW93 802 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 TRIM59Q8IWR1 403 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 FRMD1Q8N878 549 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 NETO1Q8TDF5 533 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 BHMTQ93088 406 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 NT5C1BQ96P26 610 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 ACOX2Q99424 681 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 DNAJC17Q9NVM6 304 aaKnown RBP10.24□□□□□ -0.77
UFD1-210ENST00000494054 PLK2Q9NYY3 685 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 WDR35Q9P2L0 1181 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 STARD13Q9Y3M8 1113 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 PCDHB4Q9Y5E5 795 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 RALGAPA1Q6GYQ0 2036 aa10.24□□□□□ -0.77
UFD1-210ENST00000494054 PRRT4C9JH25 899 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 SLC30A4O14863 429 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 TBXAS1P24557 533 aaPredicted RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 CORO1AP31146 461 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 GBP1P32455 592 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 MPLP40238 635 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 BCAT1P54687 386 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 SLC8A3P57103 927 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 YWHAEP62258 255 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 COG7P83436 770 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 ADIGQ0VDE8 80 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 BST2Q10589 180 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 KCNH2Q12809 1159 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 ELF2Q15723 593 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 USP39Q53GS9 565 aaKnown RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 EGFLAMQ63HQ2 1017 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 TCEAL6Q6IPX3 200 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 LCLAT1Q6UWP7 414 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 RRAGAQ7L523 313 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 TADA2BQ86TJ2 420 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 ABCA7Q8IZY2 2146 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 ARHGAP18Q8N392 663 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 PPM1KQ8N3J5 372 aa10.23□□□□□ -0.77
UFD1-210ENST00000494054 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
UFD1-210ENST00000494054 HMGB4Q8WW32 186 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms