RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 KRT19P08727 400 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ZSCAN5DPP0CG00 497 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TPBGLP0DKB5 382 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ESRRAP11474 423 aaPredicted RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 CCDC130P13994 396 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GNAZP19086 355 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ADRA1DP25100 572 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SSTR1P30872 391 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 RGS2P41220 211 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 TNFSF9P41273 254 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ATP5OP48047 213 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SERPINB4P48594 390 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 HK2P52789 917 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 DYNLT1P63172 113 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 OCRLQ01968 901 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 MBTD1Q05BQ5 628 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 BLMHQ13867 455 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 KCTD2Q14681 263 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 LBRQ14739 615 aaKnown RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 CCDC6Q16204 474 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GSTA3Q16772 222 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 INSCQ1MX18 579 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ATP13A4Q4VNC1 1196 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CYP4A22Q5TCH4 519 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 DAB2IPQ5VWQ8 1189 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 LLGL2Q6P1M3 1020 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GPR142Q7Z601 462 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ZNF410Q86VK4 478 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CRLF3Q8IUI8 442 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 ANKMY2Q8IV38 441 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 WDR75Q8IWA0 830 aaKnown RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 KIF2BQ8N4N8 673 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 LRRC52Q8N7C0 313 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 FAM71DQ8N9W8 422 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 GLIS1Q8NBF1 620 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 FAM13CQ8NE31 585 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 CCDC110Q8TBZ0 833 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SLC7A6OSQ96CW6 309 aaPredicted RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 CPXM1Q96SM3 734 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 PPP1R12CQ9BZL4 782 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.92□□□□□ -0.5
RFC4-214ENST00000494047 NXF1Q9UBU9 619 aaKnown RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 ZC3H7BQ9UGR2 993 aaKnown RBP11.92□□□□□ -0.5
RFC4-214ENST00000494047 HAO1Q9UJM8 370 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 LRCH1Q9Y2L9 728 aa11.92□□□□□ -0.5
RFC4-214ENST00000494047 SLC15A5A6NIM6 579 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 A6NJR5 290 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 PEX11AO75192 247 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 H2AFYO75367 372 aaKnown RBP11.91□□□□□ -0.5
RFC4-214ENST00000494047 TMEM63AO94886 807 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 GJB1P08034 283 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 SRGAP2CP0DJJ0 459 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 PDGFRAP16234 1089 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 DNAJB2P25686 324 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 IL1R2P27930 398 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 CRHR1P34998 444 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 ELK3P41970 407 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 RAP1GDS1P52306 607 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 AIF1P55008 147 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
RFC4-214ENST00000494047 WASHC5Q12768 1159 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 LAMC2Q13753 1193 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 MUM1Q2TAK8 710 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 ZNF394Q53GI3 561 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 FNBP1LQ5T0N5 605 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 IRGCQ6NXR0 463 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 SCARA5Q6ZMJ2 495 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 C4orf50Q6ZRC1 276 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 C1orf127Q8N9H9 656 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 STON2Q8WXE9 905 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 HSPH1Q92598 858 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 OXNAD1Q96HP4 312 aaPredicted RBP11.91□□□□□ -0.5
RFC4-214ENST00000494047 HPDLQ96IR7 371 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 PWWP2AQ96N64 755 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 FAM118BQ9BPY3 351 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 SLCO1B3Q9NPD5 702 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 SIRPGQ9P1W8 387 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 BTBD7Q9P203 1132 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 CNTN3Q9P232 1028 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 CHMP2BQ9UQN3 213 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 SSX2IPQ9Y2D8 614 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 PLLPQ9Y342 182 aa11.91□□□□□ -0.5
RFC4-214ENST00000494047 GLRA3O75311 464 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 FAM163BP0C2L3 166 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 STAG3L1P0CL83 205 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 CCL5P13501 91 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 GRK2P25098 689 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 PNPLA4P41247 253 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 GARSP41250 739 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 MAGEA3P43357 314 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 CLCN2P51788 898 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 KLC1Q07866 573 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 MAP2K5Q13163 448 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 FRG1Q14331 258 aaKnown RBP11.9□□□□□ -0.5
RFC4-214ENST00000494047 DPYSL2Q16555 572 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 CTC1Q2NKJ3 1217 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 SMTNL2Q2TAL5 461 aa11.9□□□□□ -0.5
RFC4-214ENST00000494047 KBTBD12Q3ZCT8 623 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms