RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 VTA1Q9NP79 307 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 MED4Q9NPJ6 270 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 C1orf112Q9NSG2 853 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 PSD3Q9NYI0 1048 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ERAP1Q9NZ08 941 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 UVRAGQ9P2Y5 699 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ZC3H7BQ9UGR2 993 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 AMACRQ9UHK6 382 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 GTF2IRD1Q9UHL9 959 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 TNFSF13BQ9Y275 285 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 U3KQE9 123 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 MKI67P46013 3256 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 TCRBV5S1A1TA0A578 114 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 TCRBV7S2A1N4TA0A589 114 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 LACTBL1A8MY62 500 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 MAGEB2O15479 319 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 TTI1O43156 1089 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 DAPK3O43293 454 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 PAX4O43316 350 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 DNAJA2O60884 412 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CSDE1O75534 798 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 RRM1P23921 792 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 TBXAS1P24557 533 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CTNNA1P35221 906 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 FLT3P36888 993 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 HSPA9P38646 679 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 ADCYAP1R1P41586 468 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CLCN3P51790 818 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 GUCY2FP51841 1108 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 DRG2P55039 364 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 OXCT1P55809 520 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 NOMO3P69849 1222 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 NOP14P78316 857 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CCNA1P78396 465 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CLCQ05315 142 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 PAK2Q13177 524 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 GPS2Q13227 327 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 TFDP1Q14186 410 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CYP1B1Q16678 543 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 C2CD6Q53TS8 623 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 MARCH8Q5T0T0 291 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 NAA35Q5VZE5 725 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 DUPD1Q68J44 220 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 PLEKHA7Q6IQ23 1121 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 MTHFD1LQ6UB35 978 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 TMEM270Q6UE05 265 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 TRIM72Q6ZMU5 477 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 MON1BQ7L1V2 547 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 MAATS1Q7Z4T9 603 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 ADAT2Q7Z6V5 191 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CDR2LQ86X02 465 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 EFCAB13Q8IY85 973 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 TMEM192Q8IY95 271 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 THNSL1Q8IYQ7 743 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 KIAA0319LQ8IZA0 1049 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 UBL4BQ8N7F7 174 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 FAM181AQ8N9Y4 354 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 RBBP8NLQ8NC74 664 aaPredicted RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 PPTC7Q8NI37 304 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 NPLOC4Q8TAT6 608 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CXorf38Q8TB03 319 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 RIN3Q8TB24 985 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 ZNF606Q8WXB4 792 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 EXOC4Q96A65 974 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 VCPIP1Q96JH7 1222 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 ZIM3Q96PE6 472 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CELF4Q9BZC1 486 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 XYLT2Q9H1B5 865 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 CDT1Q9H211 546 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 PCMTD2Q9NV79 361 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 VPS18Q9P253 973 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 SIX4Q9UIU6 781 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 PRDM4Q9UKN5 801 aa6.36□□□□□ -1.39
CPSF7-213ENST00000494016 G3BP2Q9UN86 482 aaKnown RBP6.36□□□□□ -1.39
CPSF7-213ENST00000494016 COL1A2P08123 1366 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 A0A087WZ62 844 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 CCDC66A2RUB6 948 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 GOLGA6BA6NDN3 693 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 CHURC1-FNTBB4DL54 471 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 H0YGN5 161 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 INO80B-WBP1J3KQ70 363 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 ADCY6O43306 1168 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 PROSCO94903 275 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 WEE2P0C1S8 567 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 STAG3L1P0CL83 205 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 MYBL1P10243 752 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 MCF2P10911 925 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 MAPK4P31152 587 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 RWDD2BP57060 319 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 CAP1Q01518 475 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 FOXD4Q12950 439 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-213ENST00000494016 MAMLD1Q13495 774 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 CUL1Q13616 776 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 ACVR2BQ13705 512 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 GRB14Q14449 540 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 CLUL1Q15846 466 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 UAP1Q16222 522 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-213ENST00000494016 PPP2R5EQ16537 467 aa6.35□□□□□ -1.39
CPSF7-213ENST00000494016 SLC10A6Q3KNW5 377 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms