RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GOLGA8MH3BSY2 632 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 ALOX15BO15296 676 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 RASA4O43374 803 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 BANF1O75531 89 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 SUN1O94901 812 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 MRPS6P82932 125 aaKnown RBP14.32□□□□□ -0.12
VCP-207ENST00000493886 GNASQ5JWF2 1037 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 SPATA21Q7Z572 469 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 ZBED8Q8IZ13 594 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 FITM2Q8N6M3 262 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 ARMC2Q8NEN0 867 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 SLC2A14Q8TDB8 520 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 TBCBQ99426 244 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 SNRNP25Q9BV90 132 aaKnown RBP14.32□□□□□ -0.12
VCP-207ENST00000493886 DNAI2Q9GZS0 605 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 PTGESO14684 152 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 KPNA6O60684 536 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 LCP1P13796 627 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 EZRP15311 586 aaKnown RBP14.32□□□□□ -0.12
VCP-207ENST00000493886 IL4RP24394 825 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 MAGEA8P43361 318 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 HDAC4P56524 1084 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 ROR1Q01973 937 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 PDIA2Q13087 525 aaKnown RBP14.32□□□□□ -0.12
VCP-207ENST00000493886 ANKRD22Q5VYY1 191 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 SLC26A9Q7LBE3 791 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 ZC3H18Q86VM9 953 aaKnown RBP14.32□□□□□ -0.12
VCP-207ENST00000493886 NAT8LQ8N9F0 302 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 MTG1Q9BT17 334 aaPredicted RBP14.32□□□□□ -0.12
VCP-207ENST00000493886 PCDH18Q9HCL0 1135 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 CDY2AQ9Y6F7 541 aa14.32□□□□□ -0.12
VCP-207ENST00000493886 M0QZ92 97 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 SNUPNO95149 360 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 TFE3P19532 575 aaPredicted RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 LRPAP1P30533 357 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 RPL34P49207 117 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 HIF1AQ16665 826 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 CGB2Q6NT52 195 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 DARS2Q6PI48 645 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 OSTM1Q86WC4 334 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 C4orf33Q8N1A6 199 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 KLHL29Q96CT2 875 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 TNIP3Q96KP6 325 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 ZFP42Q96MM3 310 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 CYLDQ9NQC7 956 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 NKIRAS1Q9NYS0 192 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 MDM4O15151 490 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 OAS1P00973 400 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 SCNN1AP37088 669 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 PTPN9P43378 593 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 ACADSBP45954 432 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 GJA9P57773 515 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 GAD2Q05329 585 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 CA9Q16790 459 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 C1orf228Q6PIY5 440 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 TOP6BLQ8N6T0 577 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 CKAP2Q8WWK9 683 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 PPP1R10Q96QC0 940 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 EURLQ9NYK6 297 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 GTF2IRD1Q9UHL9 959 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 TRPV2Q9Y5S1 764 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 EXOC1LA0A1B0GW35 172 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 KRT16P08779 473 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 WARSP23381 471 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 TKTP29401 623 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 STIP1P31948 543 aaKnown RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 FOXN2P32314 431 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 MGAT5Q09328 741 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 DNAJC3Q13217 504 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 ZNF280DQ6N043 979 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 CXCL17Q6UXB2 119 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 RIBC1Q8N443 379 aaPredicted RBP14.31□□□□□ -0.12
VCP-207ENST00000493886 PQLC3Q8N755 202 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 PLD5Q8N7P1 536 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 B3GALNT2Q8NCR0 500 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 HSFY1Q96LI6 401 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 VPS37BQ9H9H4 285 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 MCM8Q9UJA3 840 aa14.31□□□□□ -0.12
VCP-207ENST00000493886 H7C0C1 242 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 APOL1O14791 398 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 CYBAP13498 195 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 ATP5OP48047 213 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 NRLP54845 237 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 ARL4CP56559 192 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 ARCQ7LC44 396 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 AGAP11Q8TF27 550 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 C11orf84Q9BUA3 381 aaPredicted RBP14.3□□□□□ -0.12
VCP-207ENST00000493886 PHACTR1Q9C0D0 580 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 SLCO1B3Q9NPD5 702 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 SCN10AQ9Y5Y9 1956 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 MEIS3P2A8K0S8 358 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 CYB561D2O14569 222 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 PGK1P00558 417 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 GSTA1P08263 222 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 NQO1P15559 274 aaKnown RBP14.3□□□□□ -0.12
VCP-207ENST00000493886 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
VCP-207ENST00000493886 VSIG1Q86XK7 387 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 ANKMY2Q8IV38 441 aa14.3□□□□□ -0.12
VCP-207ENST00000493886 PCDH19Q8TAB3 1148 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms