RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SLC20A1Q8WUM9 679 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 FAM120BQ96EK7 910 aaKnown RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 PACSIN1Q9BY11 444 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 NMRK2Q9NPI5 230 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 ARHGAP20Q9P2F6 1191 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 ACO1P21399 889 aaKnown RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 BST2Q10589 180 aaKnown RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 ANGPT1Q15389 498 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 ERAP2Q6P179 960 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 SETD9Q8NE22 299 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 ATG4CQ96DT6 458 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 APOPT1Q96IL0 206 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 ASB2Q96Q27 587 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 GPRC5DQ9NZD1 345 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 CHORDC1Q9UHD1 332 aaPredicted RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 CNTNAP4Q9C0A0 1308 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 CRABP2P29373 138 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 CHRNA5P30532 468 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 TGM3Q08188 693 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 R3HDM1Q15032 1099 aaKnown RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 ABRAQ8N0Z2 381 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 DCLK3Q9C098 648 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 ANKZF1Q9H8Y5 726 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 COPS7BQ9H9Q2 264 aaPredicted RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 VTA1Q9NP79 307 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 DNALI1O14645 258 aaPredicted RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 ZCCHC18P0CG32 403 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 TMEM62Q0P6H9 643 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 EHD4Q9H223 541 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 DUSP10Q9Y6W6 482 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 ATP9AO75110 1047 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 TNFAIP8O95379 198 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 GPC1P35052 558 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 GP5P40197 560 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 USP39Q53GS9 565 aaKnown RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 TBCELQ5QJ74 424 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 WDR41Q9HAD4 459 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 CACNA2D2Q9NY47 1150 aa20.68■□□□□ 0.9
RNF40-203ENST00000493683 DDX20Q9UHI6 824 aaKnown RBP20.68■□□□□ 0.9
RNF40-203ENST00000493683 C15orf38-AP3S2A0A0A6YYH1 394 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 KRT6AP02538 564 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 KRT6BP04259 564 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 SKIV2L2P42285 1042 aaKnown RBP20.67■□□□□ 0.9
RNF40-203ENST00000493683 KRT6CP48668 564 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 SLC16A1P53985 500 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 ALDH6A1Q02252 535 aaKnown RBP20.67■□□□□ 0.9
RNF40-203ENST00000493683 CDC16Q13042 620 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 VPS72Q15906 364 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 ARPINQ7Z6K5 226 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 ADGRF2Q8IZF7 708 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 TMEM121Q9BTD3 319 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 FUCA2Q9BTY2 467 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 LACRTQ9GZZ8 138 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 RHBDL2Q9NX52 303 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 ABI2Q9NYB9 513 aaPredicted RBP20.67■□□□□ 0.9
RNF40-203ENST00000493683 SLC25A13Q9UJS0 675 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 VANGL2Q9ULK5 521 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 NR2C2P49116 596 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 NPY2RP49146 381 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 SPANXN3Q5MJ09 141 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 PCNX4Q63HM2 1172 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 UCMAQ8WVF2 138 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 PGM2Q96G03 612 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 ITGA11Q9UKX5 1188 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 LRG1P02750 347 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 GRK3P35626 688 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 PTPN11Q06124 597 aaPredicted RBP20.67■□□□□ 0.9
RNF40-203ENST00000493683 DMGDHQ9UI17 866 aaKnown RBP20.67■□□□□ 0.9
RNF40-203ENST00000493683 CDC42BPAQ5VT25 1732 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 PGAM1P18669 254 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 ZNF135P52742 658 aaPredicted RBP20.67■□□□□ 0.9
RNF40-203ENST00000493683 ZNF284Q2VY69 593 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 FBXL16Q8N461 479 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 C19orf18Q8NEA5 215 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 FICDQ9BVA6 458 aa20.67■□□□□ 0.9
RNF40-203ENST00000493683 UTP6Q9NYH9 597 aaKnown RBP20.67■□□□□ 0.9
RNF40-203ENST00000493683 PLA2G6O60733 806 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 RENBPP51606 427 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 CDH17Q12864 832 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 ACOT1Q86TX2 421 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 SNRNP27Q8WVK2 155 aaKnown RBP20.66■□□□□ 0.9
RNF40-203ENST00000493683 TMEM79Q9BSE2 394 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 TSEN34Q9BSV6 310 aaKnown RBP20.66■□□□□ 0.9
RNF40-203ENST00000493683 STN1Q9H668 368 aaKnown RBP20.66■□□□□ 0.9
RNF40-203ENST00000493683 TRHDEQ9UKU6 1024 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 E9PBE3 544 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 KLHL41O60662 606 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 ZNF157P51786 506 aaPredicted RBP20.66■□□□□ 0.9
RNF40-203ENST00000493683 ZNF268Q14587 947 aaPredicted RBP20.66■□□□□ 0.9
RNF40-203ENST00000493683 NUDT12Q9BQG2 462 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 CBWD1Q9BRT8 395 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 KLHL25Q9H0H3 589 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 CROTQ9UKG9 612 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 ALADP13716 330 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 CD151P48509 253 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 CACNA2D1P54289 1103 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 PHKG1Q16816 387 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 DEFB107AQ8IZN7 70 aa20.66■□□□□ 0.9
RNF40-203ENST00000493683 RMND5BQ96G75 393 aaPredicted RBP20.66■□□□□ 0.9
RNF40-203ENST00000493683 CPNE1Q99829 537 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms