RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SCAF8Q9UPN6 1271 aaKnown RBP3.96□□□□□ -1.78
PTCD3-218ENST00000493430 MED16Q9Y2X0 877 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 AFG3L2Q9Y4W6 797 aa3.96□□□□□ -1.78
PTCD3-218ENST00000493430 ROCK2O75116 1388 aaKnown RBP3.96□□□□□ -1.78
PTCD3-218ENST00000493430 MYH14Q7Z406 1995 aaKnown RBP3.96□□□□□ -1.78
PTCD3-218ENST00000493430 SSH2Q76I76 1423 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 COL24A1Q17RW2 1714 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 SIPA1L3O60292 1781 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 SBNO1A3KN83 1393 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 SOCS2O14508 198 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 DSCR3O14972 297 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 FGBP02675 491 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 MYCLP12524 364 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ATP5F1P24539 256 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 SLC11A2P49281 568 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 RENBPP51606 427 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ALDH5A1P51649 535 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 DGKEP52429 567 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 WNT3P56703 355 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 RBM6P78332 1123 aaKnown RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 KRT17Q04695 432 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 Q4G0T1 1027 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ZNF772Q68DY9 489 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ZNF813Q6ZN06 617 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 CAND1Q86VP6 1230 aaKnown RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ZNF280BQ86YH2 543 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 IZUMO1Q8IYV9 350 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ABRAQ8N0Z2 381 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 NGDNQ8NEJ9 315 aaKnown RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ADAMTS18Q8TE60 1221 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 FYTTD1Q96QD9 318 aaKnown RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 NUP88Q99567 741 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 MESP1Q9BRJ9 268 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 ARMT1Q9H993 441 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 PIH1D1Q9NWS0 290 aaKnown RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 CPA4Q9UI42 421 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 STXBP5LQ9Y2K9 1186 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 AFDNP55196 1824 aaKnown RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 TJP1Q07157 1748 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 KIAA1551Q9HCM1 1747 aa3.95□□□□□ -1.78
PTCD3-218ENST00000493430 CENPJQ9HC77 1338 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-218ENST00000493430 BRCA1P38398 1863 aaKnown RBP3.94□□□□□ -1.78
PTCD3-218ENST00000493430 A0A1W2PP64 1363 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 POLR3AO14802 1390 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-218ENST00000493430 TCRBV5S1A1TA0A578 114 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 AP4M1O00189 453 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 FCHO1O14526 889 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 ALDH2P05091 517 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 ADORA2AP29274 412 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 TKTP29401 623 aaKnown RBP3.94□□□□□ -1.78
PTCD3-218ENST00000493430 E2F1Q01094 437 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 ZNF268Q14587 947 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-218ENST00000493430 LRRC41Q15345 812 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 FAM187BQ17R55 369 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 LY6KQ17RY6 165 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 CRELD2Q6UXH1 353 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-218ENST00000493430 ZBTB46Q86UZ6 589 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 GRAMD1CQ8IYS0 662 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 SIRT6Q8N6T7 355 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 CELF5Q8N6W0 485 aaKnown RBP3.94□□□□□ -1.78
PTCD3-218ENST00000493430 HPS3Q969F9 1004 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 CHMP4CQ96CF2 233 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 RSPRY1Q96DX4 576 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 C1GALT1C1Q96EU7 318 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 CCDC17Q96LX7 622 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 CGRRF1Q99675 332 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 BRIP1Q9BX63 1249 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 TCF7L1Q9HCS4 588 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 AMFRQ9UKV5 643 aa3.94□□□□□ -1.78
PTCD3-218ENST00000493430 CPSF1Q10570 1443 aaKnown RBP3.94□□□□□ -1.78
PTCD3-218ENST00000493430 ARHGEF10O15013 1369 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 GPRASP1Q5JY77 1395 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 TONSLQ96HA7 1378 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 FNDC1Q4ZHG4 1894 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 BTBD19C9JJ37 291 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 TMEM232C9JQI7 657 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 H3BNC9 293 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 PSMD9O00233 223 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 A1BGP04217 495 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 TMEM191BP0C7N4 346 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 CBSLP0DN79 551 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 KCNA3P22001 575 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 FPR3P25089 353 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 CBSP35520 551 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 PRKAG1P54619 331 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 RAPGEF1Q13905 1077 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 FGL2Q14314 439 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 CYP1B1Q16678 543 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 ZIK1Q3SY52 487 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 C4orf46Q504U0 113 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 RNASE12Q5GAN4 147 aaKnown RBP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 ATAT1Q5SQI0 421 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 LMBRD2Q68DH5 695 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 SHC4Q6S5L8 630 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 BCDIN3DQ7Z5W3 292 aaKnown RBP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 ZDHHC17Q8IUH5 632 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 UNC5CLQ8IV45 518 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 SFTPA1Q8IWL2 248 aa3.93□□□□□ -1.78
PTCD3-218ENST00000493430 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.93□□□□□ -1.78
PTCD3-218ENST00000493430 SAMD14Q8IZD0 417 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms