RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 C3orf20Q8ND61 904 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 PRSS33Q8NF86 280 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 JOSD2Q8TAC2 188 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 RNF139Q8WU17 664 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 PBXIP1Q96AQ6 731 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 RPGRIP1Q96KN7 1286 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 MCEEQ96PE7 176 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 PHOX2BQ99453 314 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 NUP85Q9BW27 656 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 NACA2Q9H009 215 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 WDR6Q9NNW5 1121 aaKnown RBP17.99■□□□□ 0.47
LIME1-208ENST00000493265 CTTNBP2NLQ9P2B4 639 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 NAALADL1Q9UQQ1 740 aa17.99■□□□□ 0.47
LIME1-208ENST00000493265 NCANO14594 1321 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 MDM4O15151 490 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 HSF2BPO75031 334 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 MOSPD3O75425 235 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 PAPLNO95428 1278 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 TBX18O95935 607 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 ZDHHC11BP0C7U3 371 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 SP100P23497 879 aaPredicted RBP17.98■□□□□ 0.47
LIME1-208ENST00000493265 PPP3CCP48454 512 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 PSEN1P49768 467 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 MAMLD1Q13495 774 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 CBX2Q14781 532 aaPredicted RBP17.98■□□□□ 0.47
LIME1-208ENST00000493265 DCAF6Q58WW2 860 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 C10orf120Q5SQS8 335 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 HECTD3Q5T447 861 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 SYPL2Q5VXT5 272 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 CYP2S1Q96SQ9 504 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 POPDC2Q9HBU9 364 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 ABCC13Q9NSE7 274 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIME1-208ENST00000493265 ADGRG1Q9Y653 693 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIME1-208ENST00000493265 SCINQ9Y6U3 715 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 DOCK6Q96HP0 2047 aa17.98■□□□□ 0.47
LIME1-208ENST00000493265 SYNJ2BP-COX16A0A087WUM0 186 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 A0A0U1RQJ8 604 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 RCCD1A6NED2 376 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 SIGLEC16A6NMB1 481 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 TLR5O60602 858 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 DAB1O75553 588 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 CYP1A2P05177 515 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 FYNP06241 537 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 RFC1P35251 1148 aaPredicted RBP17.97■□□□□ 0.47
LIME1-208ENST00000493265 FLT3P36888 993 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 RPL7AP62424 266 aaKnown RBP17.97■□□□□ 0.47
LIME1-208ENST00000493265 ZXDAP98168 799 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 EFEMP1Q12805 493 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 IER5LQ5T953 404 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 PLEKHA7Q6IQ23 1121 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 ARL14EPQ8N8R7 260 aaPredicted RBP17.97■□□□□ 0.47
LIME1-208ENST00000493265 ADAM32Q8TC27 787 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 ATRIPQ8WXE1 791 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 PHF7Q9BWX1 381 aaPredicted RBP17.97■□□□□ 0.47
LIME1-208ENST00000493265 TRIM7Q9C029 511 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 POMKQ9H5K3 350 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 MRPL47Q9HD33 250 aaKnown RBP17.97■□□□□ 0.47
LIME1-208ENST00000493265 AVENQ9NQS1 362 aaPredicted RBP17.97■□□□□ 0.47
LIME1-208ENST00000493265 ASNSD1Q9NWL6 643 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.97■□□□□ 0.47
LIME1-208ENST00000493265 COX16Q9P0S2 106 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 RASAL2Q9UJF2 1139 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 TMEM59LQ9UK28 342 aa17.97■□□□□ 0.47
LIME1-208ENST00000493265 TCRBV5S1A1TA0A578 114 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 COCHO43405 550 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 GLI1P08151 1106 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 CCDC175P0C221 793 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 PDGFRAP16234 1089 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 GBP2P32456 591 aaPredicted RBP17.96■□□□□ 0.47
LIME1-208ENST00000493265 SCNN1AP37088 669 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 NOP2P46087 812 aaKnown RBP17.96■□□□□ 0.47
LIME1-208ENST00000493265 VAV2P52735 878 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 GSCP56915 257 aaPredicted RBP17.96■□□□□ 0.47
LIME1-208ENST00000493265 BMP8AQ7Z5Y6 402 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 MIB1Q86YT6 1006 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 SUGP1Q8IWZ8 645 aaKnown RBP17.96■□□□□ 0.47
LIME1-208ENST00000493265 RXFP2Q8WXD0 754 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 BTBD6Q96KE9 485 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 ZSWIM3Q96MP5 696 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 SLC2A13Q96QE2 648 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 SLC22A12Q96S37 553 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 TRIM62Q9BVG3 475 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 SLC46A2Q9BY10 475 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 LACRTQ9GZZ8 138 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 SMG9Q9H0W8 520 aaKnown RBP17.96■□□□□ 0.47
LIME1-208ENST00000493265 SMPD4Q9NXE4 827 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 CLIC5Q9NZA1 410 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 SFMBT1Q9UHJ3 866 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 INTUQ9ULD6 942 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 PYCARDQ9ULZ3 195 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 OBSL1O75147 1896 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 NOTCH4Q99466 2003 aa17.96■□□□□ 0.47
LIME1-208ENST00000493265 TRAV19A0A0A6YYK7 116 aa17.95■□□□□ 0.46
LIME1-208ENST00000493265 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
LIME1-208ENST00000493265 CKMP06732 381 aa17.95■□□□□ 0.46
LIME1-208ENST00000493265 MBL2P11226 248 aaPredicted RBP17.95■□□□□ 0.46
LIME1-208ENST00000493265 HDCP19113 662 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms