RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 RASAL3Q86YV0 1011 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 NKD1Q969G9 470 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 TGS1Q96RS0 853 aaKnown RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 BBS2Q9BXC9 721 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 THAP9Q9H5L6 903 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 SETD4Q9NVD3 440 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 UBP1Q9NZI7 540 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 TRPC4Q9UBN4 977 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 ARIH1Q9Y4X5 557 aaPredicted RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 PODXLO00592 558 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 ENDOD1O94919 500 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 PDGFRAP16234 1089 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 OC90Q02509 493 aaPredicted RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 CARTPTQ16568 116 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 LONRF1Q17RB8 773 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 TCHHL1Q5QJ38 904 aaPredicted RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 CCDC54Q8NEL0 328 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 PRCCQ92733 491 aaPredicted RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 CLIP3Q96DZ5 547 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 GOLPH3LQ9H4A5 285 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 SLC2A4RGQ9NR83 387 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 ANKRD6Q9Y2G4 727 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 TBX3O15119 743 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 VTNP04004 478 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 UMPSP11172 480 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 EIF4BP23588 611 aaKnown RBP5.56□□□□□ -1.52
FN1-224ENST00000492816 CHRNB4P30926 498 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 IFNGR2P38484 337 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 MAP3K7CLP57077 242 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 ITGA7Q13683 1181 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 RUBCNQ92622 972 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 FAIM2Q9BWQ8 316 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 RAD21L1Q9H4I0 556 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 SMPD4Q9NXE4 827 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 PCDHGC3Q9UN70 934 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 PCDHA11Q9Y5I1 949 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 SNX14Q9Y5W7 946 aa5.56□□□□□ -1.52
FN1-224ENST00000492816 NDUFAB1O14561 156 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 NOL4O94818 638 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 FKBP9O95302 570 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 FSHRP23945 695 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 LIFRP42702 1097 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CBX5P45973 191 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 NUGGCQ68CJ6 796 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 FKBP9P1Q75LS8 142 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 BLOC1S5Q8TDH9 187 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 LENG9Q96B70 501 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 OSMRQ99650 979 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 ZNF717Q9BY31 904 aaPredicted RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 RSPH9Q9H1X1 276 aaPredicted RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 TMEM245Q9H330 911 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 PHTF1Q9UMS5 762 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 ADGRG1Q9Y653 693 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CLASP1Q7Z460 1538 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 SLC28A1O00337 649 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 AP3D1O14617 1153 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 PSIP1O75475 530 aaKnown RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 POTEIP0CG38 1075 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 BMP4P12644 408 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CREB1P16220 341 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 EPHB2P29323 1055 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 NAMPTP43490 491 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 RCAN1P53805 252 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 UBE3AQ05086 875 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 ILF3Q12906 894 aaKnown RBP eCLIP5.55□□□□□ -1.529e-9■■■■■ 34.4
FN1-224ENST00000492816 COBLL1Q53SF7 1204 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 VN1R5Q7Z5H4 357 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 SFR1Q86XK3 245 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 HJURPQ8NCD3 748 aaPredicted RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 HEXDCQ8WVB3 486 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 STARD8Q92502 1023 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CABS1Q96KC9 395 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 C11orf70Q9BRQ4 267 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 DPY30Q9C005 99 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CDC14AQ9UNH5 594 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 GPR75-ASB3A0A0A6YYF3 556 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 H7C0S8 307 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 FSBPO95073 299 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 SLC35G4P0C7Q5 338 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 AKR1B1P15121 316 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 TYK2P29597 1187 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CPA2P48052 419 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CERCAMQ5T4B2 595 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 ATXN7L2Q5T6C5 722 aaPredicted RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 MPZL3Q6UWV2 235 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 CXCL17Q6UXB2 119 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 TPGS1Q6ZTW0 290 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 GPR142Q7Z601 462 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 TM9SF4Q92544 642 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 RAD54LQ92698 747 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 JSRP1Q96MG2 331 aaPredicted RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 DCP1AQ9NPI6 582 aaPredicted RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 RGS18Q9NS28 235 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 DUS2Q9NX74 493 aaKnown RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 SCAF8Q9UPN6 1271 aaKnown RBP5.55□□□□□ -1.52
FN1-224ENST00000492816 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 ASB3Q9Y575 518 aa5.55□□□□□ -1.52
FN1-224ENST00000492816 PRR5-ARHGAP8B1AHC4 643 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms