RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 CPA6Q8N4T0 437 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 DDX1Q92499 740 aaKnown RBP7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 BPIFA3Q9BQP9 254 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 SLC4A5Q9BY07 1137 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 MIS12Q9H081 205 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 PLCB1Q9NQ66 1216 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 CNGB3Q9NQW8 809 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 POLR3BQ9NW08 1133 aaPredicted RBP7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 PCDHGC3Q9UN70 934 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 ANAPC1Q9H1A4 1944 aa7.54□□□□□ -1.2
PDLIM1-204ENST00000492511 PATJQ8NI35 1801 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 TICRRQ7Z2Z1 1910 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SYCE3A1L190 88 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 LGALS16A8MUM7 142 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 K7EQS6 105 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 PES1O00541 588 aaKnown RBP7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SLC9A3R1O14745 358 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 TEX33O43247 280 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 PAPSS1O43252 624 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 MED7O43513 233 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 NFATC1O95644 943 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 HMBSP08397 361 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 NBL1P41271 181 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 JAM2P57087 298 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SATB1Q01826 763 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 PTK2Q05397 1052 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 MEA1Q16626 185 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 DGKKQ5KSL6 1271 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 LY6G5CQ5SRR4 150 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 BTBD8Q5XKL5 378 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 TSSK4Q6SA08 328 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 MIB1Q86YT6 1006 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SIX6OS1Q8N1H7 587 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 ARHGAP18Q8N392 663 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 PHTF2Q8N3S3 785 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 IRGQQ8WZA9 623 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 EDEM1Q92611 657 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 NELL1Q92832 810 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 CD101Q93033 1021 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 NKD2Q969F2 451 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 PIWIL1Q96J94 861 aaKnown RBP7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 P2RY13Q9BPV8 354 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 STK33Q9BYT3 514 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 NACA2Q9H009 215 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 LHX5Q9H2C1 402 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 PRMT8Q9NR22 394 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SPHK2Q9NRA0 654 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 ABCC13Q9NSE7 274 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SPATA6Q9NWH7 488 aaPredicted RBP7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 MARCH2Q9P0N8 246 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 TBC1D14Q9P2M4 693 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SFMBT1Q9UHJ3 866 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 RASAL2Q9UJF2 1139 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
PDLIM1-204ENST00000492511 ZNF638Q14966 1978 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 A0A0A0MRY4 1105 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 SLC12A8A0AV02 714 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 PRR23AA6NEV1 266 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 E5RJQ4 531 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 F8VZ95 297 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 GFRA2O00451 464 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 TRIM24O15164 1050 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 HOXC11O43248 304 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 FBXO21O94952 628 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 ADH5P11766 374 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 CYP11B1P15538 503 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 CHRNB2P17787 502 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 CDK11BP21127 795 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 DRD1P21728 446 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 ID4P47928 161 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 ZNF165P49910 485 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 POLR2FP61218 127 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 COG7P83436 770 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 CSTF1Q05048 431 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 GRSF1Q12849 480 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 NR1H3Q13133 447 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 PDCLQ13371 301 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 EIF4EBP2Q13542 120 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 RAPGEF1Q13905 1077 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 LRRC32Q14392 662 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 SYCP1Q15431 976 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 TAF5Q15542 800 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 TRIP4Q15650 581 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 SYPL2Q5VXT5 272 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 MSANTD2Q6P1R3 559 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 TADA2BQ86TJ2 420 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 NOP9Q86U38 636 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 PASD1Q8IV76 773 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 FMNL3Q8IVF7 1028 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 ETFBKMTQ8IXQ9 262 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 SYNPOQ8N3V7 929 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 NAT16Q8N8M0 369 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 OTUB2Q96DC9 234 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 NAP1L5Q96NT1 182 aaPredicted RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 ERGIC2Q96RQ1 377 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 CPXM1Q96SM3 734 aa7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 CDK5RAP1Q96SZ6 601 aaKnown RBP7.52□□□□□ -1.21
PDLIM1-204ENST00000492511 CBX8Q9HC52 389 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms