RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ADAM21Q9UKJ8 722 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 PCDHB8Q9UN66 801 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC195A0A1B0GUA6 201 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 A0A1W2PQH9 124 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC151A5D8V7 595 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 LRRC10BA6NIK2 292 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 F5H5T6 163 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 H3BRJ5 948 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TULP2O00295 520 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SYN3O14994 580 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 GRM6O15303 877 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 RTN3O95197 1032 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 LUC7L3O95232 432 aaKnown RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TRUB2O95900 331 aaKnown RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MYBL1P10243 752 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 KRT10P13645 584 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TCP1P17987 556 aaKnown RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TAF5Q15542 800 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CLEC16AQ2KHT3 1053 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MUM1Q2TAK8 710 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 PABPC1LQ4VXU2 614 aaKnown RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 PMF1Q6P1K2 205 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ARHGEF18Q6ZSZ5 1173 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 FAM183BPQ6ZVS7 135 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 PID1Q7Z2X4 250 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MCOLN2Q8IZK6 566 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ARHGAP18Q8N392 663 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ATP6V0D2Q8N8Y2 350 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SLC4A11Q8NBS3 891 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SUSD3Q96L08 255 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM62Q9BVG3 475 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 GANQ9H2C0 597 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 AJAP1Q9UKB5 411 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 NAALADL1Q9UQQ1 740 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SQORQ9Y6N5 450 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 A0A1W2PQJ5 194 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TBC1D3BA6NDS4 549 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 GOLGA8KD6RF30 607 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 GOLGA8MH3BSY2 632 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TEX28O15482 410 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 KIF1CO43896 1103 aaKnown RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 SOD2P04179 222 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 KCNE1P15382 129 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 IGFBP6P24592 240 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CDK7P50613 346 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 VCPP55072 806 aaKnown RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 YWHAGP61981 247 aaKnown RBP eCLIP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 RPL7AP62424 266 aaKnown RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 NR1H3Q13133 447 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF177Q13360 481 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF235Q14590 738 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 UPP1Q16831 310 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 KCTD19Q17RG1 926 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 HP1BP3Q5SSJ5 553 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 E4F1Q66K89 784 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TXNDC8Q6A555 127 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 RNF19BQ6ZMZ0 732 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 NUDT18Q6ZVK8 323 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 DNAJB7Q7Z6W7 309 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TMEM173Q86WV6 379 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CTAGE3PQ8IX95 158 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 FAM71AQ8IYT1 594 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 LGI2Q8N0V4 545 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 C3orf58Q8NDZ4 430 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 FLCNQ8NFG4 579 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 LRRN4Q8WUT4 740 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 ARHGEF26Q96DR7 871 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TMA16Q96EY4 203 aaKnown RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 FBXL18Q96ME1 805 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CPXM1Q96SM3 734 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 ACBD6Q9BR61 282 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 DUSP16Q9BY84 665 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 SMG9Q9H0W8 520 aaKnown RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF576Q9H609 170 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 BRD9Q9H8M2 597 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 UXTQ9UBK9 157 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 FAM8A1Q9UBU6 413 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 UTP11Q9Y3A2 253 aaKnown RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TRAV19A0A0A6YYK7 116 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CBX4O00257 560 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 O00370 1275 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CASQ2O14958 399 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 KIAA0355O15063 1070 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CST8O60676 142 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 FBXO21O94952 628 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CFHP08603 1231 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 POLE2P56282 527 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 NTHL1P78549 312 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 COG7P83436 770 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 FMO1Q01740 532 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 SLC6A3Q01959 620 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 C2orf54Q08AI8 447 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TFDP2Q14188 446 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 NFIL3Q16649 462 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 RAP1GAP2Q684P5 730 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CCSAPQ6IQ19 270 aaPredicted RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CROCCP2Q86T23 111 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TDHQ8IZJ6 230 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 ARHGAP24Q8N264 748 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms