RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 SCARA5Q6ZMJ2 495 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 PAQR9Q6ZVX9 377 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 METTL3Q86U44 580 aaKnown RBP15.27■□□□□ 0.04
SSR4-212ENST00000491833 PDILTQ8N807 584 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 XXYLT1Q8NBI6 393 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 SETD7Q8WTS6 366 aaKnown RBP15.27■□□□□ 0.04
SSR4-212ENST00000491833 DNASE2BQ8WZ79 361 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 TOE1Q96GM8 510 aaKnown RBP15.27■□□□□ 0.04
SSR4-212ENST00000491833 KLF16Q9BXK1 252 aaPredicted RBP15.27■□□□□ 0.04
SSR4-212ENST00000491833 PANK2Q9BZ23 570 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 MIR1-1HGQ9H1L0 117 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 PRDM16Q9HAZ2 1276 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 SCUBE2Q9NQ36 999 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 WSB2Q9NYS7 404 aaPredicted RBP15.27■□□□□ 0.04
SSR4-212ENST00000491833 USP36Q9P275 1121 aaKnown RBP15.27■□□□□ 0.04
SSR4-212ENST00000491833 RAXQ9Y2V3 346 aa15.27■□□□□ 0.04
SSR4-212ENST00000491833 ITPR1Q14643 2758 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 PTPRBP23467 1997 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 EIF4E1BA6NMX2 242 aaKnown RBP15.26■□□□□ 0.03
SSR4-212ENST00000491833 CLIC2O15247 247 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 HOXD13P35453 343 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 ATP5C1P36542 298 aaKnown RBP15.26■□□□□ 0.03
SSR4-212ENST00000491833 MATKP42679 507 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 BIRC3Q13489 604 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 FUT11Q495W5 492 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 ZNF667Q5HYK9 610 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 IL27RAQ6UWB1 636 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 SLCO6A1Q86UG4 719 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 CADM4Q8NFZ8 388 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 HNRNPLLQ8WVV9 542 aaKnown RBP15.26■□□□□ 0.03
SSR4-212ENST00000491833 GPR174Q9BXC1 333 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 TRIM9Q9C026 710 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 GAREM1Q9H706 876 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 VRTNQ9H8Y1 702 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 CYLDQ9NQC7 956 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 TM7SF3Q9NS93 570 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 KIAA1522Q9P206 1035 aaPredicted RBP15.26■□□□□ 0.03
SSR4-212ENST00000491833 STON1Q9Y6Q2 735 aa15.26■□□□□ 0.03
SSR4-212ENST00000491833 WASH3PC4AMC7 463 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 FLRT2O43155 660 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 TGFB1I1O43294 461 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 TBX18O95935 607 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 CCDC130P13994 396 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 ZNF132P52740 706 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 CDH8P55286 799 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 MAP3K7CLP57077 242 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 SNRPFP62306 86 aaKnown RBP15.25■□□□□ 0.03
SSR4-212ENST00000491833 ASIC1P78348 528 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 FAM26FQ5R3K3 315 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 DCAF12L1Q5VU92 463 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 EPM2AIP1Q7L775 607 aaPredicted RBP15.25■□□□□ 0.03
SSR4-212ENST00000491833 TMPRSS7Q7RTY8 843 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 NELFCDQ8IXH7 590 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 FUKQ8N0W3 1084 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 ZMIZ2Q8NF64 920 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 BAHD1Q8TBE0 780 aaPredicted RBP15.25■□□□□ 0.03
SSR4-212ENST00000491833 ZNF507Q8TCN5 953 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 ZNF516Q92618 1163 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 BHMTQ93088 406 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 SMOQ99835 787 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
SSR4-212ENST00000491833 IL21RQ9HBE5 538 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 DKK4Q9UBT3 224 aa15.25■□□□□ 0.03
SSR4-212ENST00000491833 MORC2Q9Y6X9 1032 aaPredicted RBP15.25■□□□□ 0.03
SSR4-212ENST00000491833 LOC400499M0QZD8 3231 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 NBEAQ8NFP9 2946 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 NPC1O15118 1278 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 BCAT2O15382 392 aaPredicted RBP15.24■□□□□ 0.03
SSR4-212ENST00000491833 CILPO75339 1184 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 CISD3P0C7P0 127 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 PDIA4P13667 645 aaKnown RBP15.24■□□□□ 0.03
SSR4-212ENST00000491833 PGFP49763 221 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 FAM173BQ6P4H8 233 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 ACOT1Q86TX2 421 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 SLC2A14Q8TDB8 520 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 UCMAQ8WVF2 138 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 LRIG1Q96JA1 1093 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 CDC6Q99741 560 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 MKRN2Q9H000 416 aaKnown RBP15.24■□□□□ 0.03
SSR4-212ENST00000491833 CUEDC2Q9H467 287 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 CSNK1G1Q9HCP0 422 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 ITM2CQ9NQX7 267 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 PLK2Q9NYY3 685 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 FNDC3AQ9Y2H6 1198 aaKnown RBP15.24■□□□□ 0.03
SSR4-212ENST00000491833 MYH10P35580 1976 aa15.24■□□□□ 0.03
SSR4-212ENST00000491833 KCNJ18B7U540 433 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 CYP26A1O43174 497 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 STX6O43752 255 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 BEST1O76090 585 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 FAM200BP0CF97 657 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 ACADMP11310 421 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 P4HA1P13674 534 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 TRIM21P19474 475 aaKnown RBP15.23■□□□□ 0.03
SSR4-212ENST00000491833 SYT1P21579 422 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 OXTRP30559 389 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 IL12RB1P42701 662 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 TPMTP51580 245 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 AP3M2P53677 418 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 AMPD3Q01432 767 aa15.23■□□□□ 0.03
SSR4-212ENST00000491833 NCOA4Q13772 614 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms