RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ATP1A2P50993 1020 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 TDGQ13569 410 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 FAM78AQ5JUQ0 283 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 TANGO2Q6ICL3 276 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 VSTM1Q6UX27 236 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 YTHDF3Q7Z739 585 aaKnown RBP9.88□□□□□ -0.83
BRCA1-219ENST00000491747 FAM35AQ86V20 835 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 ARHGEF19Q8IW93 802 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 SH2D3CQ8N5H7 860 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 UBR7Q8N806 425 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 EIF1ADQ8N9N8 165 aaKnown RBP9.88□□□□□ -0.83
BRCA1-219ENST00000491747 LEMD2Q8NC56 503 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 ZMIZ2Q8NF64 920 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 TNIP3Q96KP6 325 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 KXD1Q9BQD3 176 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 ATXN3LQ9H3M9 355 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 GDE1Q9NZC3 331 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 IGSF9Q9P2J2 1179 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 MYO16Q9Y6X6 1858 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 SRRM3A6NNA2 597 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-219ENST00000491747 CSH1P0DML2 217 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 CSH2P0DML3 217 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 RAD23BP54727 409 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 CUL2Q13617 745 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 SLC18A3Q16572 532 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 CNPY4Q8N129 248 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 ARFGAP2Q8N6H7 521 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 SLC4A11Q8NBS3 891 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 SLC2A14Q8TDB8 520 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 RSPRY1Q96DX4 576 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 ASIC4Q96FT7 647 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 FAXDC2Q96IV6 333 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 SPATA17Q96L03 361 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 ATP6V1G3Q96LB4 118 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 MYRFLQ96LU7 910 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 ASB16Q96NS5 453 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 KRT12Q99456 494 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 SMOQ99835 787 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 NT5C1AQ9BXI3 368 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 NLRC4Q9NPP4 1024 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 GEMIN8Q9NWZ8 242 aaKnown RBP9.87□□□□□ -0.83
BRCA1-219ENST00000491747 COL4A2P08572 1712 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 ESYT3A0FGR9 886 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 CES2O00748 559 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 P4HA2O15460 535 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 HNRNPH1P31943 449 aaKnown RBP9.87□□□□□ -0.83
BRCA1-219ENST00000491747 VIPR2P41587 438 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 MNAT1P51948 309 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 KCNMA1Q12791 1236 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 TAF12Q16514 161 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 GPR158Q5T848 1215 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 IER5LQ5T953 404 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 MEI1Q5TIA1 1274 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 PHLDB3Q6NSJ2 640 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 TRIM67Q6ZTA4 783 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 CCDC91Q7Z6B0 441 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 ZSCAN18Q8TBC5 510 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-219ENST00000491747 TRMT2BQ96GJ1 504 aaKnown RBP9.87□□□□□ -0.83
BRCA1-219ENST00000491747 C8orf48Q96LL4 319 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 MED10Q9BTT4 135 aa9.87□□□□□ -0.83
BRCA1-219ENST00000491747 HELZP42694 1942 aaKnown RBP9.87□□□□□ -0.83
BRCA1-219ENST00000491747 FSBPO95073 299 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 FTCDO95954 541 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 FAM153BP0C7A2 387 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 SLC9A1P19634 815 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 ACO1P21399 889 aaKnown RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 ADORA2BP29275 332 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 POLR2FP61218 127 aaKnown RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 FAM153CQ494X1 144 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 PPP1R26Q5T8A7 1209 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 NAA35Q5VZE5 725 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 FBXW10Q5XX13 1052 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 CYFIP2Q96F07 1278 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 HNRNPABQ99729 332 aaKnown RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 SLC46A2Q9BY10 475 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 INTS2Q9H0H0 1204 aaKnown RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 FAM153AQ9UHL3 310 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 DUSP12Q9UNI6 340 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 CAPN7Q9Y6W3 813 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 KIF26AQ9ULI4 1882 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 TICRRQ7Z2Z1 1910 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 ZSCAN5CA6NGD5 496 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 TNFRSF10BO14763 440 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 GPR37L1O60883 481 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 AP1G2O75843 785 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 PDGFBP01127 241 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 CALCAP01258 141 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 HSPA9P38646 679 aaKnown RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 MDH1P40925 334 aaKnown RBP9.86□□□□□ -0.83
BRCA1-219ENST00000491747 DNA2P51530 1060 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 GPC5P78333 572 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 GUCY1A3Q02108 690 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 SIGLEC14Q08ET2 396 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 TXNDC8Q6A555 127 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 GJB7Q6PEY0 223 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 DENND5BQ6ZUT9 1274 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 MTSS1LQ765P7 747 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 MAATS1Q7Z4T9 603 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 SCAMP5Q8TAC9 235 aa9.86□□□□□ -0.83
BRCA1-219ENST00000491747 NXPE3Q969Y0 559 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms