RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 SLITRK1Q96PX8 696 aa11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 SMOQ99835 787 aa11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 MED10Q9BTT4 135 aa11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 VPS16Q9H269 839 aa11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 CCSER2Q9H7U1 834 aa11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 FAM49BQ9NUQ9 324 aa11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 LIMA1Q9UHB6 759 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 MYO18AQ92614 2054 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-211ENST00000491685 ASPMQ8IZT6 3477 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ZNF806P0C7X5 589 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 IRF1P10914 325 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 BCKDHBP21953 392 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 PMLP29590 882 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 NDST1P52848 882 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 MFAP3P55082 362 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 SHC2P98077 582 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 NCAPHQ15003 741 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 IQCB1Q15051 598 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 EMC10Q5UCC4 262 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 CDKAL1Q5VV42 579 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 SMYD5Q6GMV2 418 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ANO7Q6IWH7 933 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ENOSF1Q7L5Y1 443 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 UNC93AQ86WB7 457 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 DHX40Q8IX18 779 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ADGRG2Q8IZP9 1017 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 PHTF2Q8N3S3 785 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ALLCQ8N6M5 410 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 C12orf29Q8N999 325 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 MDGA1Q8NFP4 955 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 TSTD1Q8NFU3 115 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 SLC2A14Q8TDB8 520 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 JAKMIP2Q96AA8 810 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ACDQ96AP0 544 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 SMARCD1Q96GM5 515 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 LOXL4Q96JB6 756 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ZC3H10Q96K80 434 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 NIF3L1Q9GZT8 377 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 DMAP1Q9NPF5 467 aaPredicted RBP11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 IL37Q9NZH6 218 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 EBF1Q9UH73 591 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 CHORDC1Q9UHD1 332 aaPredicted RBP11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 ADAMTS9Q9P2N4 1935 aa11.62□□□□□ -0.55
TMEM39A-211ENST00000491685 CNOT1A5YKK6 2376 aaKnown RBP11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 FAM92AA1XBS5 289 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 SGK1O00141 431 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 TRIM24O15164 1050 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 ZZEF1O43149 2961 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 AP1G2O75843 785 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 RTN3O95197 1032 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 ZDHHC11BP0C7U3 371 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 ADH5P11766 374 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 KCNA4P22459 653 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 DGKEP52429 567 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 MAP3K7CLP57077 242 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 UBXN1Q04323 297 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 LRMPQ12912 555 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 KRT31Q15323 416 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 LY6G5CQ5SRR4 150 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 RASSF3Q86WH2 238 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 BBS7Q8IWZ6 715 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 PPM1KQ8N3J5 372 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 OVCA2Q8WZ82 227 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 SEMA4DQ92854 862 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 UBE2TQ9NPD8 197 aaPredicted RBP11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 OSER1Q9NX31 292 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 TAB2Q9NYJ8 693 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 RALYQ9UKM9 306 aaKnown RBP11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 KIAA1257Q9ULG3 409 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 MMP17Q9ULZ9 603 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 DAAM1Q9Y4D1 1078 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 CEP295Q9C0D2 2601 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 SPEGQ15772 3267 aa11.61□□□□□ -0.55
TMEM39A-211ENST00000491685 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 SLC9A3R1O14745 358 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 CYP26A1O43174 497 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 CBFA2T2O43439 604 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 GREM1O60565 184 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 ADAM23O75077 832 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 KAT7O95251 611 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 KLF8O95600 359 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 ZNF18P17022 549 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 ADORA2BP29275 332 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 TIE1P35590 1138 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 KIR2DL1P43626 348 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 COPB1P53618 953 aaKnown RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 UBASH3AP57075 661 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 COL9A2Q14055 689 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 CRY1Q16526 586 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 PREPLQ4J6C6 727 aaPredicted RBP11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 SNX30Q5VWJ9 437 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 CLEC20AQ6ZU45 233 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 TTC30AQ86WT1 665 aa11.6□□□□□ -0.55
TMEM39A-211ENST00000491685 DDX42Q86XP3 938 aaKnown RBP eCLIP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms